def __init__(self, context, request):
BrowserView.__init__(self, context, request)
self.selection_macros = SelectionMacrosView(context, request)
self.icon = "++resource++bika.lims.images/query_big.png"
self.getAnalysts = getUsers(context, ["Manager", "LabManager", "Analyst"])
request.set("disable_border", 1)
def __init__(self, context, request):
BrowserView.__init__(self, context, request)
self.selection_macros = SelectionMacrosView(context, request)
self.icon = self.portal_url + "/++resource++bika.lims.images/query_big.png"
self.getAnalysts = getUsers(context, ['Manager', 'LabManager', 'Analyst'])
request.set('disable_border', 1)
def getAnalysts(self):
analysts = getUsers(self.context, ['Manager', 'LabManager', 'Analyst'])
analysts = analysts.sortedByKey()
ret = []
for a in analysts:
ret.append({'ResultValue': a, 'ResultText': analysts.getValue(a)})
return ret
def __init__(self, context, request):
BrowserView.__init__(self, context, request)
self.selection_macros = SelectionMacrosView(context, request)
self.icon = "++resource++bika.lims.images/query_big.png"
self.getAnalysts = getUsers(context,
['Manager', 'LabManager', 'Analyst'])
request.set('disable_border', 1)
def getAnalysts(self):
analysts = getUsers(self.context, ['Manager', 'LabManager', 'Analyst'])
analysts = analysts.sortedByKey()
ret = []
for a in analysts:
ret.append({'ResultValue': a,
'ResultText': analysts.getValue(a)})
return ret
def get_analysts(self):
analysts = getUsers(self.context, ['Manager', 'LabManager', 'Analyst'])
analysts = analysts.sortedByKey()
results = list()
for analyst_id, analyst_name in analysts.items():
results.append({'ResultValue': analyst_id,
'ResultText': analyst_name})
return results
def __call__(self):
self.selection_macros = SelectionMacrosView(self.context, self.request)
self.icon = self.portal_url + "/++resource++bika.lims.images/report_big.png"
self.getAnalysts = getUsers(self.context, ['Manager', 'LabManager', 'Analyst'])
self.additional_reports = []
adapters = getAdapters((self.context, ), IProductivityReport)
for name, adapter in adapters:
report_dict = adapter(self.context, self.request)
report_dict['id'] = name
self.additional_reports.append(report_dict)
return self.template()
def __call__(self):
self.selection_macros = SelectionMacrosView(self.context, self.request)
self.icon = self.portal_url + "/++resource++bika.lims.images/report_big.png"
self.getAnalysts = getUsers(self.context,
['Manager', 'LabManager', 'Analyst'])
self.additional_reports = []
adapters = getAdapters((self.context, ), IProductivityReport)
for name, adapter in adapters:
report_dict = adapter(self.context, self.request)
report_dict['id'] = name
self.additional_reports.append(report_dict)
return self.template()
def _createWorksheet(base, worksheettemplate, analyst):
"""
This function creates a new worksheet takeing advantatge of the analyst
variable. If there isn't an analyst definet, the system will puck up the
the first one obtained in a query.
"""
if not(analyst):
# Get any analyst
analyst = getUsers(base, ['Manager', 'LabManager', 'Analyst'])[1]
folder = base.bika_setup.worksheets
_id = folder.invokeFactory('Worksheet', id=tmpID())
ws = folder[_id]
ws.unmarkCreationFlag()
new_ws_id = renameAfterCreation(ws)
ws.edit(
Number=new_ws_id,
Analyst=analyst,
)
if worksheettemplate:
ws.applyWorksheetTemplate(worksheettemplate)
return ws
def lookup_sampler_uid(import_user):
#Lookup sampler's uid
found = False
userid = None
user_ids = []
users = getUsers(self, ['LabManager', 'Sampler']).items()
for (samplerid, samplername) in users:
if import_user == samplerid:
found = True
userid = samplerid
break
if import_user == samplername:
user_ids.append(samplerid)
if found:
return userid
if len(user_ids) == 1:
return user_ids[0]
if len(user_ids) > 1:
#raise ValueError('Sampler %s is ambiguous' % import_user)
return ''
#Otherwise
#raise ValueError('Sampler %s not found' % import_user)
return ''
def lookup_sampler_uid(import_user):
#Lookup sampler's uid
found = False
userid = None
user_ids = []
users = getUsers(self, ['LabManager', 'Sampler']).items()
for (samplerid, samplername) in users:
if import_user == samplerid:
found = True
userid = samplerid
break
if import_user == samplername:
user_ids.append(samplerid)
if found:
return userid
if len(user_ids) == 1:
return user_ids[0]
if len(user_ids) > 1:
#raise ValueError('Sampler %s is ambiguous' % import_user)
return None
#Otherwise
#raise ValueError('Sampler %s not found' % import_user)
return None
def folderitem(self, obj, item, index):
# Additional info from AnalysisRequest to be added in the item
# generated by default by bikalisting.
# Call the folderitem method from the base class
item = super(SamplesView, self).folderitem(obj, item, index)
if not item:
return None
item["Creator"] = self.user_fullname(obj.Creator)
# If we redirect from the folderitems view we should check if the
# user has permissions to medify the element or not.
priority_sort_key = obj.getPrioritySortkey
if not priority_sort_key:
# Default priority is Medium = 3.
# The format of PrioritySortKey is <priority>.<created>
priority_sort_key = "3.%s" % obj.created.ISO8601()
priority = priority_sort_key.split(".")[0]
priority_text = PRIORITIES.getValue(priority)
priority_div = """<div class="priority-ico priority-%s">
<span class="notext">%s</span><div>
"""
item["replace"]["Priority"] = priority_div % (priority, priority_text)
item["replace"]["getProfilesTitle"] = obj.getProfilesTitleStr
analysesnum = obj.getAnalysesNum
if analysesnum:
num_verified = str(analysesnum[0])
num_total = str(analysesnum[1])
item["getAnalysesNum"] = "{0}/{1}".format(num_verified, num_total)
else:
item["getAnalysesNum"] = ""
# Progress
progress_perc = obj.getProgress
item["Progress"] = progress_perc
item["replace"]["Progress"] = get_progress_bar_html(progress_perc)
item["BatchID"] = obj.getBatchID
if obj.getBatchID:
item['replace']['BatchID'] = "<a href='%s'>%s</a>" % \
(obj.getBatchURL, obj.getBatchID)
# TODO: SubGroup ???
# val = obj.Schema().getField('SubGroup').get(obj)
# item['SubGroup'] = val.Title() if val else ''
item["SamplingDate"] = self.str_date(obj.getSamplingDate)
item["getDateReceived"] = self.str_date(obj.getDateReceived)
item["getDueDate"] = self.str_date(obj.getDueDate)
item["getDatePublished"] = self.str_date(obj.getDatePublished)
item["getDateVerified"] = self.str_date(obj.getDateVerified)
if self.is_printing_workflow_enabled:
item["Printed"] = ""
printed = obj.getPrinted if hasattr(obj, "getPrinted") else "0"
print_icon = ""
if printed == "0":
print_icon = get_image("delete.png",
title=t(_("Not printed yet")))
elif printed == "1":
print_icon = get_image("ok.png",
title=t(_("Printed")))
elif printed == "2":
print_icon = get_image(
"exclamation.png",
title=t(_("Republished after last print")))
item["after"]["Printed"] = print_icon
item["SamplingDeviation"] = obj.getSamplingDeviationTitle
item["getStorageLocation"] = obj.getStorageLocationTitle
after_icons = ""
if obj.assigned_state == 'assigned':
after_icons += get_image("worksheet.png",
title=t(_("All analyses assigned")))
if item["review_state"] == 'invalid':
after_icons += get_image("delete.png",
title=t(_("Results have been withdrawn")))
due_date = obj.getDueDate
if due_date and due_date < (obj.getDatePublished or DateTime()):
due_date_str = self.ulocalized_time(due_date)
img_title = "{}: {}".format(t(_("Late Analyses")), due_date_str)
after_icons += get_image("late.png", title=img_title)
if obj.getSamplingDate and obj.getSamplingDate > DateTime():
after_icons += get_image("calendar.png",
title=t(_("Future dated sample")))
if obj.getInvoiceExclude:
after_icons += get_image("invoice_exclude.png",
title=t(_("Exclude from invoice")))
if obj.getHazardous:
after_icons += get_image("hazardous.png",
title=t(_("Hazardous")))
if obj.getInternalUse:
after_icons += get_image("locked.png", title=t(_("Internal use")))
if after_icons:
item['after']['getId'] = after_icons
item['Created'] = self.ulocalized_time(obj.created, long_format=1)
if obj.getContactUID:
item['ClientContact'] = obj.getContactFullName
item['replace']['ClientContact'] = "<a href='%s'>%s</a>" % \
(obj.getContactURL, obj.getContactFullName)
else:
item["ClientContact"] = ""
# TODO-performance: If SamplingWorkflowEnabled, we have to get the
# full object to check the user permissions, so far this is
# a performance hit.
if obj.getSamplingWorkflowEnabled:
# We don't do anything with Sampling Date.
# User can modify Sampling date
# inside AR view. In this listing view,
# we only let the user to edit Date Sampled
# and Sampler if he wants to make 'sample' transaction.
if not obj.getDateSampled:
datesampled = self.ulocalized_time(
DateTime(), long_format=True)
item["class"]["getDateSampled"] = "provisional"
else:
datesampled = self.ulocalized_time(obj.getDateSampled,
long_format=True)
sampler = obj.getSampler
if sampler:
item["replace"]["getSampler"] = obj.getSamplerFullName
if "Sampler" in self.roles and not sampler:
sampler = self.member.id
item["class"]["getSampler"] = "provisional"
# sampling workflow - inline edits for Sampler and Date Sampled
if item["review_state"] == 'to_be_sampled':
# We need to get the full object in order to check
# the permissions
full_object = obj.getObject()
checkPermission = \
self.context.portal_membership.checkPermission
# TODO Do we really need this check?
if checkPermission(TransitionSampleSample, full_object):
item["required"] = ["getSampler", "getDateSampled"]
item["allow_edit"] = ["getSampler", "getDateSampled"]
# TODO-performance: hit performance while getting the
# sample object...
# TODO Can LabManagers be a Sampler?!
samplers = getUsers(full_object, ["Sampler", ])
username = self.member.getUserName()
users = [({
"ResultValue": u,
"ResultText": samplers.getValue(u)}) for u in samplers]
item['choices'] = {'getSampler': users}
Sampler = sampler and sampler or \
(username in samplers.keys() and username) or ''
sampler = Sampler
else:
datesampled = self.ulocalized_time(obj.getDateSampled,
long_format=True)
sampler = obj.getSamplerFullName if obj.getSampler else ''
else:
datesampled = self.ulocalized_time(obj.getDateSampled,
long_format=True)
sampler = ""
item["getDateSampled"] = datesampled
item["getSampler"] = sampler
# These don't exist on ARs
# XXX This should be a list of preservers...
item["getPreserver"] = ""
item["getDatePreserved"] = ""
# Assign parent and children partitions of this sample
if self.show_partitions:
item["parent"] = obj.getRawParentAnalysisRequest
item["children"] = obj.getDescendantsUIDs or []
return item
def folderitems(self, full_objects=False):
workflow = getToolByName(self.context, "portal_workflow")
items = BikaListingView.folderitems(self)
mtool = getToolByName(self.context, 'portal_membership')
member = mtool.getAuthenticatedMember()
translate = self.context.translate
roles = member.getRoles()
hideclientlink = 'RegulatoryInspector' in roles \
and 'Manager' not in roles \
and 'LabManager' not in roles \
and 'LabClerk' not in roles
for x in range(len(items)):
if not items[x].has_key('obj'): continue
obj = items[x]['obj']
items[x]['replace']['getSampleID'] = "<a href='%s'>%s</a>" % \
(items[x]['url'], obj.getSampleID())
items[x]['replace']['Requests'] = ",".join([
"<a href='%s'>%s</a>" % (o.absolute_url(), o.Title())
for o in obj.getAnalysisRequests()
])
items[x]['Client'] = obj.aq_parent.Title()
if hideclientlink == False:
items[x]['replace']['Client'] = "<a href='%s'>%s</a>" % \
(obj.aq_parent.absolute_url(), obj.aq_parent.Title())
items[x]['Creator'] = self.user_fullname(obj.Creator())
items[x]['DateReceived'] = self.ulocalized_time(
obj.getDateReceived())
deviation = obj.getSamplingDeviation()
items[x]['SamplingDeviation'] = deviation and deviation.Title(
) or ''
items[x]['getStorageLocation'] = obj.getStorageLocation(
) and obj.getStorageLocation().Title() or ''
items[x]['AdHoc'] = obj.getAdHoc() and True or ''
items[x]['Created'] = self.ulocalized_time(obj.created())
samplingdate = obj.getSamplingDate()
items[x]['getSamplingDate'] = self.ulocalized_time(samplingdate,
long_format=1)
after_icons = ''
if obj.getSampleType().getHazardous():
after_icons += "<img title='%s' " \
"src='%s/++resource++bika.lims.images/hazardous.png'>" % \
(t(_("Hazardous")),
self.portal_url)
if obj.getSamplingDate() > DateTime():
after_icons += "<img title='%s' " \
"src='%s/++resource++bika.lims.images/calendar.png' >" % \
(t(_("Future dated sample")),
self.portal_url)
if after_icons:
items[x]['after']['getSampleID'] = after_icons
SamplingWorkflowEnabled =\
self.context.bika_setup.getSamplingWorkflowEnabled()
if not samplingdate > DateTime() \
and SamplingWorkflowEnabled:
datesampled = self.ulocalized_time(obj.getDateSampled())
if not datesampled:
datesampled = self.ulocalized_time(DateTime())
items[x]['class']['getDateSampled'] = 'provisional'
sampler = obj.getSampler().strip()
if sampler:
items[x]['replace']['getSampler'] = self.user_fullname(
sampler)
if 'Sampler' in member.getRoles() and not sampler:
sampler = member.id
items[x]['class']['getSampler'] = 'provisional'
else:
datesampled = ''
sampler = ''
items[x]['getDateSampled'] = datesampled
items[x]['getSampler'] = sampler
# sampling workflow - inline edits for Sampler and Date Sampled
checkPermission = self.context.portal_membership.checkPermission
state = workflow.getInfoFor(obj, 'review_state')
if state == 'to_be_sampled' \
and checkPermission(SampleSample, obj) \
and not samplingdate > DateTime():
items[x]['required'] = ['getSampler', 'getDateSampled']
items[x]['allow_edit'] = ['getSampler', 'getDateSampled']
samplers = getUsers(obj, ['Sampler', 'LabManager', 'Manager'])
getAuthenticatedMember = self.context.portal_membership.getAuthenticatedMember
username = getAuthenticatedMember().getUserName()
users = [({
'ResultValue': u,
'ResultText': samplers.getValue(u)
}) for u in samplers]
items[x]['choices'] = {'getSampler': users}
Sampler = sampler and sampler or \
(username in samplers.keys() and username) or ''
items[x]['getSampler'] = Sampler
# These don't exist on samples
# the columns exist just to set "preserve" transition from lists.
# XXX This should be a list of preservers...
items[x]['getPreserver'] = ''
items[x]['getDatePreserved'] = ''
# inline edits for Preserver and Date Preserved
checkPermission = self.context.portal_membership.checkPermission
if checkPermission(PreserveSample, obj):
items[x]['required'] = ['getPreserver', 'getDatePreserved']
items[x]['allow_edit'] = ['getPreserver', 'getDatePreserved']
preservers = getUsers(obj,
['Preserver', 'LabManager', 'Manager'])
getAuthenticatedMember = self.context.portal_membership.getAuthenticatedMember
username = getAuthenticatedMember().getUserName()
users = [({
'ResultValue': u,
'ResultText': preservers.getValue(u)
}) for u in preservers]
items[x]['choices'] = {'getPreserver': users}
preserver = username in preservers.keys() and username or ''
items[x]['getPreserver'] = preserver
items[x]['getDatePreserved'] = self.ulocalized_time(DateTime())
items[x]['class']['getPreserver'] = 'provisional'
items[x]['class']['getDatePreserved'] = 'provisional'
# Hide Preservation/Sampling workflow actions if the edit columns
# are not displayed.
toggle_cols = self.get_toggle_cols()
new_states = []
for i, state in enumerate(self.review_states):
if state['id'] == self.review_state:
if 'getSampler' not in toggle_cols \
or 'getDateSampled' not in toggle_cols:
if 'hide_transitions' in state:
state['hide_transitions'].append('sample')
else:
state['hide_transitions'] = [
'sample',
]
if 'getPreserver' not in toggle_cols \
or 'getDatePreserved' not in toggle_cols:
if 'hide_transitions' in state:
state['hide_transitions'].append('preserve')
else:
state['hide_transitions'] = [
'preserve',
]
new_states.append(state)
self.review_states = new_states
return items
def _getSamplersDisplayList(self):
""" Returns the available users in the system with the roles
'LabManager' and/or 'Sampler'
"""
return getUsers(self, ['LabManager', 'Sampler'])
def select_analyst(self):
self.analysts = getUsers(self.context, ['Manager', 'LabManager', 'Analyst'])
return self.select_analyst_pt()
def select_analyst(self, allow_blank=False, style=None):
self.style = style
self.analysts = getUsers(self.context, ["Manager", "Analyst", "LabManager"], allow_blank)
return self.select_analyst_pt()
def __init__(self, context, request):
super(FolderView, self).__init__(context, request)
self.catalog = 'bika_catalog'
self.contentFilter = {
'portal_type': 'Worksheet',
'review_state':['open', 'to_be_verified', 'verified', 'rejected'],
'sort_on':'id',
'sort_order': 'reverse'}
self.context_actions = {_('Add'):
{'url': 'worksheet_add',
'icon': '++resource++bika.lims.images/add.png',
'class': 'worksheet_add'}}
self.show_table_only = False
self.show_sort_column = False
self.show_select_row = False
self.show_select_all_checkbox = True
self.show_select_column = True
self.pagesize = 25
self.restrict_results = False
request.set('disable_border', 1)
self.icon = self.portal_url + "/++resource++bika.lims.images/worksheet_big.png"
self.title = self.context.translate(_("Worksheets"))
self.description = ""
pm = getToolByName(context, "portal_membership")
# this is a property of self, because self.getAnalysts returns it
self.analysts = getUsers(self, ['Manager', 'LabManager', 'Analyst'])
self.analysts = self.analysts.sortedByKey()
bsc = getToolByName(context, 'bika_setup_catalog')
templates = [t for t in bsc(portal_type = 'WorksheetTemplate',
inactive_state = 'active')]
self.templates = [(t.UID, t.Title) for t in templates]
self.templates.sort(lambda x, y: cmp(x[1], y[1]))
self.instruments = [(i.UID, i.Title) for i in
bsc(portal_type = 'Instrument',
inactive_state = 'active')]
self.instruments.sort(lambda x, y: cmp(x[1], y[1]))
self.templateinstruments = {}
for t in templates:
i = t.getObject().getInstrument()
if i:
self.templateinstruments[t.UID] = i.UID()
else:
self.templateinstruments[t.UID] = ''
self.columns = {
'Title': {'title': _('Worksheet'),
'index': 'sortable_title'},
'Priority': {'title': _('Priority'),
'index':'Priority',
'toggle': True},
'Analyst': {'title': _('Analyst'),
'index':'getAnalyst',
'toggle': True},
'Template': {'title': _('Template'),
'toggle': True},
'Services': {'title': _('Services'),
'sortable':False,
'toggle': False},
'SampleTypes': {'title': _('Sample Types'),
'sortable':False,
'toggle': False},
'Instrument': {'title': _('Instrument'),
'sortable':False,
'toggle': False},
'QC': {'title': _('QC'),
'sortable':False,
'toggle': False},
'QCTotals': {'title': _('QC Samples (Analyses)'),
'sortable':False,
'toggle': False},
'RoutineTotals': {'title': _('Routine Samples (Analyses)'),
'sortable':False,
'toggle': False},
'CreationDate': {'title': PMF('Date Created'),
'toggle': True,
'index': 'created'},
'state_title': {'title': _('State'),
'index': 'review_state'},
}
self.review_states = [
{'id':'default',
'title': _('All'),
'contentFilter': {'portal_type': 'Worksheet',
'review_state':['open', 'to_be_verified',],
'sort_on':'id',
'sort_order': 'reverse'},
'transitions':[{'id':'retract'},
{'id':'verify'},
{'id':'reject'}],
'columns':['Title',
'Priority',
'Analyst',
'Template',
'Services',
'SampleTypes',
'Instrument',
'QC',
'QCTotals',
'RoutineTotals',
'CreationDate',
'state_title']},
# getAuthenticatedMember does not work in __init__
# so 'mine' is configured further in 'folderitems' below.
{'id':'mine',
'title': _('Mine'),
'contentFilter': {'portal_type': 'Worksheet',
'review_state':['open', 'to_be_verified', 'verified', 'rejected'],
'sort_on':'id',
'sort_order': 'reverse'},
'transitions':[{'id':'retract'},
{'id':'verify'},
{'id':'reject'}],
'columns':['Title',
'Priority',
'Analyst',
'Template',
'Services',
'SampleTypes',
'Instrument',
'QC',
'QCTotals',
'RoutineTotals',
'CreationDate',
'state_title']},
{'id':'open',
'title': _('Open'),
'contentFilter': {'portal_type': 'Worksheet',
'review_state':'open',
'sort_on':'id',
'sort_order': 'reverse'},
'transitions':[],
'columns':['Title',
'Priority',
'Analyst',
'Template',
'Services',
'SampleTypes',
'Instrument',
'QC',
'QCTotals',
'RoutineTotals',
'CreationDate',
'state_title']},
{'id':'to_be_verified',
'title': _('To be verified'),
'contentFilter': {'portal_type': 'Worksheet',
'review_state':'to_be_verified',
'sort_on':'id',
'sort_order': 'reverse'},
'transitions':[{'id':'retract'},
{'id':'verify'},
{'id':'reject'}],
'columns':['Title',
'Priority',
'Analyst',
'Template',
'Services',
'SampleTypes',
'Instrument',
'QC',
'QCTotals',
'RoutineTotals',
'CreationDate',
'state_title']},
{'id':'verified',
'title': _('Verified'),
'contentFilter': {'portal_type': 'Worksheet',
'review_state':'verified',
'sort_on':'id',
'sort_order': 'reverse'},
'transitions':[],
'columns':['Title',
'Priority',
'Analyst',
'Template',
'Services',
'SampleTypes',
'Instrument',
'QC',
'QCTotals',
'RoutineTotals',
'CreationDate',
'state_title']},
]
def select_user(self):
self.users = getUsers(self.context, [
'Manager', 'LabManager', 'LabClerk', 'Analyst', 'Sampler',
'Preserver', 'Verifier'
])
return self.select_user_pt()
def folderitem(self, obj, item, index):
# Additional info from AnalysisRequest to be added in the item
# generated by default by bikalisting.
# Call the folderitem method from the base class
item = BikaListingView.folderitem(self, obj, item, index)
if not item:
return None
# This variable will contain the full analysis request if there is
# need to work with the full object instead of the brain
full_object = None
item["Creator"] = self.user_fullname(obj.Creator)
# If we redirect from the folderitems view we should check if the
# user has permissions to medify the element or not.
priority_sort_key = obj.getPrioritySortkey
if not priority_sort_key:
# Default priority is Medium = 3.
# The format of PrioritySortKey is <priority>.<created>
priority_sort_key = "3.%s" % obj.created.ISO8601()
priority = priority_sort_key.split(".")[0]
priority_text = PRIORITIES.getValue(priority)
priority_div = """<div class="priority-ico priority-%s">
<span class="notext">%s</span><div>
"""
item["replace"]["Priority"] = priority_div % (priority, priority_text)
item["replace"]["getProfilesTitle"] = obj.getProfilesTitleStr
analysesnum = obj.getAnalysesNum
if analysesnum:
num_verified = str(analysesnum[0])
num_total = str(analysesnum[1])
item["getAnalysesNum"] = "{0}/{1}".format(num_verified, num_total)
else:
item["getAnalysesNum"] = ""
# Progress
num_verified = 0
num_submitted = 0
num_total = 0
if analysesnum and len(analysesnum) > 1:
num_verified = analysesnum[0]
num_total = analysesnum[1]
num_submitted = num_total - num_verified
if len(analysesnum) > 2:
num_wo_results = analysesnum[2]
num_submitted = num_total - num_verified - num_wo_results
num_steps_total = num_total * 2
num_steps = (num_verified * 2) + (num_submitted)
progress_perc = 0
if num_steps > 0 and num_steps_total > 0:
progress_perc = (num_steps * 100) / num_steps_total
progress = '<div class="progress-bar-container">' + \
'<div class="progress-bar" style="width:{0}%"></div>' + \
'<div class="progress-perc">{0}%</div></div>'
item["replace"]["Progress"] = progress.format(progress_perc)
item["BatchID"] = obj.getBatchID
if obj.getBatchID:
item['replace']['BatchID'] = "<a href='%s'>%s</a>" % \
(obj.getBatchURL, obj.getBatchID)
# TODO: SubGroup ???
# val = obj.Schema().getField('SubGroup').get(obj)
# item['SubGroup'] = val.Title() if val else ''
date = obj.getSamplingDate
item["SamplingDate"] = \
self.ulocalized_time(date, long_format=1) if date else ""
date = obj.getDateReceived
item["getDateReceived"] = \
self.ulocalized_time(date, long_format=1) if date else ""
date = obj.getDatePublished
item["getDatePublished"] = \
self.ulocalized_time(date, long_format=1) if date else ""
date = obj.getDateVerified
item["getDateVerified"] = \
self.ulocalized_time(date, long_format=1) if date else ""
if self.printwfenabled:
item["Printed"] = ""
printed = obj.getPrinted if hasattr(obj, "getPrinted") else "0"
print_icon = ""
if printed == "0":
print_icon = \
"""<img src='%s/++resource++bika.lims.images/delete.png'
title='%s'>
""" % (self.portal_url, t(_("Not printed yet")))
elif printed == "1":
print_icon = \
"""<img src='%s/++resource++bika.lims.images/ok.png'
title='%s'>
""" % (self.portal_url, t(_("Printed")))
elif printed == "2":
print_icon = \
"""<img
src='%s/++resource++bika.lims.images/exclamation.png'
title='%s'>
""" \
% (self.portal_url, t(_("Republished after last print")))
item["after"]["Printed"] = print_icon
item["SamplingDeviation"] = obj.getSamplingDeviationTitle
item["getStorageLocation"] = obj.getStorageLocationTitle
after_icons = ""
# Getting a dictionary with each workflow id and current state in it
states_dict = obj.getObjectWorkflowStates
if obj.assigned_state == 'assigned':
after_icons += \
"""<img src='%s/++resource++bika.lims.images/worksheet.png'
title='%s'/>
""" % (self.portal_url, t(_("All analyses assigned")))
if states_dict.get('review_state', '') == 'invalid':
after_icons += \
"""<img src='%s/++resource++bika.lims.images/delete.png'
title='%s'/>
""" % (self.portal_url, t(_("Results have been withdrawn")))
if obj.getLate:
after_icons += \
"""<img src='%s/++resource++bika.lims.images/late.png'
title='%s'>
""" % (self.portal_url, t(_("Late Analyses")))
if obj.getSamplingDate and obj.getSamplingDate > DateTime():
after_icons += \
"""<img src='%s/++resource++bika.lims.images/calendar.png'
title='%s'>
""" % (self.portal_url, t(_("Future dated sample")))
if obj.getInvoiceExclude:
after_icons += \
"""<img
src='%s/++resource++bika.lims.images/invoice_exclude.png'
title='%s'>
""" % (self.portal_url, t(_("Exclude from invoice")))
if obj.getHazardous:
after_icons += \
"""<img src='%s/++resource++bika.lims.images/hazardous.png'
title='%s'>
""" % (self.portal_url, t(_("Hazardous")))
if after_icons:
item['after']['getId'] = after_icons
item['Created'] = self.ulocalized_time(obj.created, long_format=1)
if obj.getContactUID:
item['ClientContact'] = obj.getContactFullName
item['replace']['ClientContact'] = "<a href='%s'>%s</a>" % \
(obj.getContactURL, obj.getContactFullName)
else:
item["ClientContact"] = ""
# TODO-performance: If SamplingWorkflowEnabled, we have to get the
# full object to check the user permissions, so far this is
# a performance hit.
if obj.getSamplingWorkflowEnabled:
# We don't do anything with Sampling Date.
# User can modify Sampling date
# inside AR view. In this listing view,
# we only let the user to edit Date Sampled
# and Sampler if he wants to make 'sample' transaction.
if not obj.getDateSampled:
datesampled = self.ulocalized_time(DateTime(),
long_format=True)
item["class"]["getDateSampled"] = "provisional"
else:
datesampled = self.ulocalized_time(obj.getDateSampled,
long_format=True)
sampler = obj.getSampler
if sampler:
item["replace"]["getSampler"] = obj.getSamplerFullName
if "Sampler" in self.roles and not sampler:
sampler = self.member.id
item["class"]["getSampler"] = "provisional"
# sampling workflow - inline edits for Sampler and Date Sampled
if states_dict.get('review_state', '') == 'to_be_sampled':
# We need to get the full object in order to check
# the permissions
full_object = obj.getObject()
checkPermission =\
self.context.portal_membership.checkPermission
if checkPermission(SampleSample, full_object):
item["required"] = ["getSampler", "getDateSampled"]
item["allow_edit"] = ["getSampler", "getDateSampled"]
# TODO-performance: hit performance while getting the
# sample object...
# TODO Can LabManagers be a Sampler?!
samplers = getUsers(full_object.getSample(), [
"Sampler",
])
username = self.member.getUserName()
users = [({
"ResultValue": u,
"ResultText": samplers.getValue(u)
}) for u in samplers]
item['choices'] = {'getSampler': users}
Sampler = sampler and sampler or \
(username in samplers.keys() and username) or ''
sampler = Sampler
else:
datesampled = self.ulocalized_time(obj.getDateSampled,
long_format=True)
sampler = obj.getSamplerFullName if obj.getSampler else ''
else:
datesampled = self.ulocalized_time(obj.getDateSampled,
long_format=True)
sampler = ""
item["getDateSampled"] = datesampled
item["getSampler"] = sampler
# These don't exist on ARs
# XXX This should be a list of preservers...
item["getPreserver"] = ""
item["getDatePreserved"] = ""
# TODO-performance: If inline preservation wants to be used, we
# have to get the full object to check the user permissions, so
# far this is a performance hit.
# inline edits for Preserver and Date Preserved
# if checkPermission(PreserveSample, obj):
# item['required'] = ['getPreserver', 'getDatePreserved']
# item['allow_edit'] = ['getPreserver', 'getDatePreserved']
# preservers = getUsers(obj, ['Preserver',
# 'LabManager', 'Manager'])
# username = self.member.getUserName()
# users = [({'ResultValue': u,
# 'ResultText': preservers.getValue(u)})
# for u in preservers]
# item['choices'] = {'getPreserver': users}
# preserver = username in preservers.keys() and username or ''
# item['getPreserver'] = preserver
# item['getDatePreserved'] = self.ulocalized_time(
# DateTime(),
# long_format=1)
# item['class']['getPreserver'] = 'provisional'
# item['class']['getDatePreserved'] = 'provisional'
# Submitting user may not verify results
# Thee conditions to improve performance, some functions to check
# the condition need to get the full analysis request.
if states_dict.get("review_state", "") == "to_be_verified":
allowed = user.has_permission(VerifyPermission,
username=self.member.getUserName())
# TODO-performance: isUserAllowedToVerify getts all analysis
# objects inside the analysis request.
if allowed:
# Gettin the full object if not get before
full_object = full_object if full_object else obj.getObject()
if not full_object.isUserAllowedToVerify(self.member):
item["after"]["state_title"] = \
"""<img src='++resource++bika.lims.images/submitted-by-current-user.png'
title='%s'/>
""" % t(_("Cannot verify: Submitted by current user"))
return item
def getSamplers(self):
return getUsers(self, ["LabManager", "Sampler"])
def folderitems(self, full_objects=False):
workflow = getToolByName(self.context, "portal_workflow")
items = BikaListingView.folderitems(self)
mtool = getToolByName(self.context, 'portal_membership')
member = mtool.getAuthenticatedMember()
roles = member.getRoles()
hideclientlink = 'RegulatoryInspector' in roles \
and 'Manager' not in roles \
and 'LabManager' not in roles \
and 'LabClerk' not in roles
for x in range(len(items)):
if 'obj' not in items[x]:
continue
obj = items[x]['obj']
sample = obj.getSample()
if getSecurityManager().checkPermission(EditResults, obj):
url = obj.absolute_url() + "/manage_results"
else:
url = obj.absolute_url()
items[x]['Client'] = obj.aq_parent.Title()
if (hideclientlink is False):
items[x]['replace']['Client'] = "<a href='%s'>%s</a>" % \
(obj.aq_parent.absolute_url(), obj.aq_parent.Title())
items[x]['Creator'] = self.user_fullname(obj.Creator())
items[x]['getRequestID'] = obj.getRequestID()
items[x]['replace']['getRequestID'] = "<a href='%s'>%s</a>" % \
(url, items[x]['getRequestID'])
items[x]['getSample'] = sample
items[x]['replace']['getSample'] = \
"<a href='%s'>%s</a>" % (sample.absolute_url(), sample.Title())
if obj.getAnalysesNum():
items[x]['getAnalysesNum'] = str(obj.getAnalysesNum()[0]) + '/' + str(obj.getAnalysesNum()[1])
else:
items[x]['getAnalysesNum'] = ''
batch = obj.getBatch()
if batch:
items[x]['BatchID'] = batch.getBatchID()
items[x]['replace']['BatchID'] = "<a href='%s'>%s</a>" % \
(batch.absolute_url(), items[x]['BatchID'])
else:
items[x]['BatchID'] = ''
val = obj.Schema().getField('SubGroup').get(obj)
items[x]['SubGroup'] = val.Title() if val else ''
samplingdate = obj.getSample().getSamplingDate()
items[x]['SamplingDate'] = self.ulocalized_time(samplingdate, long_format=1)
items[x]['getDateReceived'] = self.ulocalized_time(obj.getDateReceived())
items[x]['getDatePublished'] = self.ulocalized_time(obj.getDatePublished())
deviation = sample.getSamplingDeviation()
items[x]['SamplingDeviation'] = deviation and deviation.Title() or ''
priority = obj.getPriority()
items[x]['Priority'] = '' # priority.Title()
items[x]['getStorageLocation'] = sample.getStorageLocation() and sample.getStorageLocation().Title() or ''
items[x]['AdHoc'] = sample.getAdHoc() and True or ''
after_icons = ""
state = workflow.getInfoFor(obj, 'worksheetanalysis_review_state')
if state == 'assigned':
after_icons += "<img src='%s/++resource++bika.lims.images/worksheet.png' title='%s'/>" % \
(self.portal_url, t(_("All analyses assigned")))
if workflow.getInfoFor(obj, 'review_state') == 'invalid':
after_icons += "<img src='%s/++resource++bika.lims.images/delete.png' title='%s'/>" % \
(self.portal_url, t(_("Results have been withdrawn")))
if obj.getLate():
after_icons += "<img src='%s/++resource++bika.lims.images/late.png' title='%s'>" % \
(self.portal_url, t(_("Late Analyses")))
if samplingdate > DateTime():
after_icons += "<img src='%s/++resource++bika.lims.images/calendar.png' title='%s'>" % \
(self.portal_url, t(_("Future dated sample")))
if obj.getInvoiceExclude():
after_icons += "<img src='%s/++resource++bika.lims.images/invoice_exclude.png' title='%s'>" % \
(self.portal_url, t(_("Exclude from invoice")))
if sample.getSampleType().getHazardous():
after_icons += "<img src='%s/++resource++bika.lims.images/hazardous.png' title='%s'>" % \
(self.portal_url, t(_("Hazardous")))
if after_icons:
items[x]['after']['getRequestID'] = after_icons
items[x]['Created'] = self.ulocalized_time(obj.created())
contact = obj.getContact()
if contact:
items[x]['ClientContact'] = contact.Title()
items[x]['replace']['ClientContact'] = "<a href='%s'>%s</a>" % \
(contact.absolute_url(), contact.Title())
else:
items[x]['ClientContact'] = ""
SamplingWorkflowEnabled = sample.getSamplingWorkflowEnabled()
if SamplingWorkflowEnabled and not samplingdate > DateTime():
datesampled = self.ulocalized_time(sample.getDateSampled())
if not datesampled:
datesampled = self.ulocalized_time(
DateTime(),
long_format=1)
items[x]['class']['getDateSampled'] = 'provisional'
sampler = sample.getSampler().strip()
if sampler:
items[x]['replace']['getSampler'] = self.user_fullname(sampler)
if 'Sampler' in member.getRoles() and not sampler:
sampler = member.id
items[x]['class']['getSampler'] = 'provisional'
else:
datesampled = ''
sampler = ''
items[x]['getDateSampled'] = datesampled
items[x]['getSampler'] = sampler
# sampling workflow - inline edits for Sampler and Date Sampled
checkPermission = self.context.portal_membership.checkPermission
state = workflow.getInfoFor(obj, 'review_state')
if state == 'to_be_sampled' \
and checkPermission(SampleSample, obj) \
and not samplingdate > DateTime():
items[x]['required'] = ['getSampler', 'getDateSampled']
items[x]['allow_edit'] = ['getSampler', 'getDateSampled']
samplers = getUsers(sample, ['Sampler', 'LabManager', 'Manager'])
username = member.getUserName()
users = [({'ResultValue': u, 'ResultText': samplers.getValue(u)})
for u in samplers]
items[x]['choices'] = {'getSampler': users}
Sampler = sampler and sampler or \
(username in samplers.keys() and username) or ''
items[x]['getSampler'] = Sampler
# These don't exist on ARs
# XXX This should be a list of preservers...
items[x]['getPreserver'] = ''
items[x]['getDatePreserved'] = ''
# inline edits for Preserver and Date Preserved
checkPermission = self.context.portal_membership.checkPermission
if checkPermission(PreserveSample, obj):
items[x]['required'] = ['getPreserver', 'getDatePreserved']
items[x]['allow_edit'] = ['getPreserver', 'getDatePreserved']
preservers = getUsers(obj, ['Preserver', 'LabManager', 'Manager'])
username = member.getUserName()
users = [({'ResultValue': u, 'ResultText': preservers.getValue(u)})
for u in preservers]
items[x]['choices'] = {'getPreserver': users}
preserver = username in preservers.keys() and username or ''
items[x]['getPreserver'] = preserver
items[x]['getDatePreserved'] = self.ulocalized_time(
DateTime(),
long_format=1)
items[x]['class']['getPreserver'] = 'provisional'
items[x]['class']['getDatePreserved'] = 'provisional'
# Submitting user may not verify results
if items[x]['review_state'] == 'to_be_verified' and \
not checkPermission(VerifyOwnResults, obj):
self_submitted = False
try:
review_history = list(workflow.getInfoFor(obj, 'review_history'))
review_history.reverse()
for event in review_history:
if event.get('action') == 'submit':
if event.get('actor') == member.getId():
self_submitted = True
break
if self_submitted:
items[x]['after']['state_title'] = \
"<img src='++resource++bika.lims.images/submitted-by-current-user.png' title='%s'/>" % \
t(_("Cannot verify: Submitted by current user"))
except Exception:
pass
# Hide Preservation/Sampling workflow actions if the edit columns
# are not displayed.
toggle_cols = self.get_toggle_cols()
new_states = []
for i, state in enumerate(self.review_states):
if state['id'] == self.review_state:
if 'getSampler' not in toggle_cols \
or 'getDateSampled' not in toggle_cols:
if 'hide_transitions' in state:
state['hide_transitions'].append('sample')
else:
state['hide_transitions'] = ['sample', ]
if 'getPreserver' not in toggle_cols \
or 'getDatePreserved' not in toggle_cols:
if 'hide_transitions' in state:
state['hide_transitions'].append('preserve')
else:
state['hide_transitions'] = ['preserve', ]
new_states.append(state)
self.review_states = new_states
return items
def __init__(self, context, request):
BrowserView.__init__(self, context, request)
self.icon = "++resource++bika.lims.images/report_big.png"
self.TimeOrDate = TimeOrDate
self.getAnalysts = getUsers(context, ["Manager", "LabManager", "Analyst"])
def folderitems(self, full_objects=False):
workflow = getToolByName(self.context, "portal_workflow")
items = BikaListingView.folderitems(self)
mtool = getToolByName(self.context, 'portal_membership')
member = mtool.getAuthenticatedMember()
roles = member.getRoles()
hideclientlink = 'RegulatoryInspector' in roles \
and 'Manager' not in roles \
and 'LabManager' not in roles \
and 'LabClerk' not in roles
for x in range(len(items)):
if 'obj' not in items[x]:
continue
obj = items[x]['obj']
sample = obj.getSample()
if getSecurityManager().checkPermission(EditResults, obj):
url = obj.absolute_url() + "/manage_results"
else:
url = obj.absolute_url()
items[x]['Client'] = obj.aq_parent.Title()
if (hideclientlink is False):
items[x]['replace']['Client'] = "<a href='%s'>%s</a>" % \
(obj.aq_parent.absolute_url(), obj.aq_parent.Title())
items[x]['Creator'] = self.user_fullname(obj.Creator())
items[x]['getRequestID'] = obj.getRequestID()
items[x]['replace']['getRequestID'] = "<a href='%s'>%s</a>" % \
(url, items[x]['getRequestID'])
items[x]['getSample'] = sample
items[x]['replace']['getSample'] = \
"<a href='%s'>%s</a>" % (sample.absolute_url(), sample.Title())
items[x]['replace']['getProfilesTitle'] = ", ".join(
[p.Title() for p in obj.getProfiles()])
if obj.getAnalysesNum():
items[x]['getAnalysesNum'] = str(obj.getAnalysesNum()[0]) + '/' + str(obj.getAnalysesNum()[1])
else:
items[x]['getAnalysesNum'] = ''
batch = obj.getBatch()
if batch:
items[x]['BatchID'] = batch.getBatchID()
items[x]['replace']['BatchID'] = "<a href='%s'>%s</a>" % \
(batch.absolute_url(), items[x]['BatchID'])
else:
items[x]['BatchID'] = ''
val = obj.Schema().getField('SubGroup').get(obj)
items[x]['SubGroup'] = val.Title() if val else ''
samplingdate = obj.getSample().getSamplingDate()
items[x]['SamplingDate'] = self.ulocalized_time(samplingdate, long_format=1)
items[x]['getDateReceived'] = self.ulocalized_time(obj.getDateReceived())
items[x]['getDatePublished'] = self.ulocalized_time(obj.getDatePublished())
deviation = sample.getSamplingDeviation()
items[x]['SamplingDeviation'] = deviation and deviation.Title() or ''
priority = obj.getPriority()
items[x]['Priority'] = '' # priority.Title()
items[x]['getStorageLocation'] = sample.getStorageLocation() and sample.getStorageLocation().Title() or ''
items[x]['AdHoc'] = sample.getAdHoc() and True or ''
after_icons = ""
state = workflow.getInfoFor(obj, 'worksheetanalysis_review_state')
if state == 'assigned':
after_icons += "<img src='%s/++resource++bika.lims.images/worksheet.png' title='%s'/>" % \
(self.portal_url, t(_("All analyses assigned")))
if workflow.getInfoFor(obj, 'review_state') == 'invalid':
after_icons += "<img src='%s/++resource++bika.lims.images/delete.png' title='%s'/>" % \
(self.portal_url, t(_("Results have been withdrawn")))
if obj.getLate():
after_icons += "<img src='%s/++resource++bika.lims.images/late.png' title='%s'>" % \
(self.portal_url, t(_("Late Analyses")))
if samplingdate > DateTime():
after_icons += "<img src='%s/++resource++bika.lims.images/calendar.png' title='%s'>" % \
(self.portal_url, t(_("Future dated sample")))
if obj.getInvoiceExclude():
after_icons += "<img src='%s/++resource++bika.lims.images/invoice_exclude.png' title='%s'>" % \
(self.portal_url, t(_("Exclude from invoice")))
if sample.getSampleType().getHazardous():
after_icons += "<img src='%s/++resource++bika.lims.images/hazardous.png' title='%s'>" % \
(self.portal_url, t(_("Hazardous")))
if after_icons:
items[x]['after']['getRequestID'] = after_icons
items[x]['Created'] = self.ulocalized_time(obj.created())
contact = obj.getContact()
if contact:
items[x]['ClientContact'] = contact.Title()
items[x]['replace']['ClientContact'] = "<a href='%s'>%s</a>" % \
(contact.absolute_url(), contact.Title())
else:
items[x]['ClientContact'] = ""
SamplingWorkflowEnabled = sample.getSamplingWorkflowEnabled()
if SamplingWorkflowEnabled and not samplingdate > DateTime():
datesampled = self.ulocalized_time(sample.getDateSampled())
if not datesampled:
datesampled = self.ulocalized_time(
DateTime(),
long_format=1)
items[x]['class']['getDateSampled'] = 'provisional'
sampler = sample.getSampler().strip()
if sampler:
items[x]['replace']['getSampler'] = self.user_fullname(sampler)
if 'Sampler' in member.getRoles() and not sampler:
sampler = member.id
items[x]['class']['getSampler'] = 'provisional'
else:
datesampled = ''
sampler = ''
items[x]['getDateSampled'] = datesampled
items[x]['getSampler'] = sampler
# sampling workflow - inline edits for Sampler and Date Sampled
checkPermission = self.context.portal_membership.checkPermission
state = workflow.getInfoFor(obj, 'review_state')
if state == 'to_be_sampled' \
and checkPermission(SampleSample, obj) \
and not samplingdate > DateTime():
items[x]['required'] = ['getSampler', 'getDateSampled']
items[x]['allow_edit'] = ['getSampler', 'getDateSampled']
samplers = getUsers(sample, ['Sampler', 'LabManager', 'Manager'])
username = member.getUserName()
users = [({'ResultValue': u, 'ResultText': samplers.getValue(u)})
for u in samplers]
items[x]['choices'] = {'getSampler': users}
Sampler = sampler and sampler or \
(username in samplers.keys() and username) or ''
items[x]['getSampler'] = Sampler
# These don't exist on ARs
# XXX This should be a list of preservers...
items[x]['getPreserver'] = ''
items[x]['getDatePreserved'] = ''
# inline edits for Preserver and Date Preserved
checkPermission = self.context.portal_membership.checkPermission
if checkPermission(PreserveSample, obj):
items[x]['required'] = ['getPreserver', 'getDatePreserved']
items[x]['allow_edit'] = ['getPreserver', 'getDatePreserved']
preservers = getUsers(obj, ['Preserver', 'LabManager', 'Manager'])
username = member.getUserName()
users = [({'ResultValue': u, 'ResultText': preservers.getValue(u)})
for u in preservers]
items[x]['choices'] = {'getPreserver': users}
preserver = username in preservers.keys() and username or ''
items[x]['getPreserver'] = preserver
items[x]['getDatePreserved'] = self.ulocalized_time(
DateTime(),
long_format=1)
items[x]['class']['getPreserver'] = 'provisional'
items[x]['class']['getDatePreserved'] = 'provisional'
# Submitting user may not verify results
if items[x]['review_state'] == 'to_be_verified' and \
not checkPermission(VerifyOwnResults, obj):
self_submitted = False
try:
review_history = list(workflow.getInfoFor(obj, 'review_history'))
review_history.reverse()
for event in review_history:
if event.get('action') == 'submit':
if event.get('actor') == member.getId():
self_submitted = True
break
if self_submitted:
items[x]['after']['state_title'] = \
"<img src='++resource++bika.lims.images/submitted-by-current-user.png' title='%s'/>" % \
t(_("Cannot verify: Submitted by current user"))
except Exception:
pass
# Hide Preservation/Sampling workflow actions if the edit columns
# are not displayed.
toggle_cols = self.get_toggle_cols()
new_states = []
for i, state in enumerate(self.review_states):
if state['id'] == self.review_state:
if 'getSampler' not in toggle_cols \
or 'getDateSampled' not in toggle_cols:
if 'hide_transitions' in state:
state['hide_transitions'].append('sample')
else:
state['hide_transitions'] = ['sample', ]
if 'getPreserver' not in toggle_cols \
or 'getDatePreserved' not in toggle_cols:
if 'hide_transitions' in state:
state['hide_transitions'].append('preserve')
else:
state['hide_transitions'] = ['preserve', ]
new_states.append(state)
self.review_states = new_states
return items
def __call__(self):
self.selection_macros = SelectionMacrosView(self.context, self.request)
self.icon = self.portal_url + "/++resource++bika.lims.images/report_big.png"
self.getAnalysts = getUsers(self.context, ['Manager', 'LabManager', 'Analyst'])
return self.template()
def get_analysts(self):
"""Returns Analysts
"""
roles = ["Manager", "LabManager", "Analyst"]
return getUsers(self.context, roles)
def folderitems(self, full_objects = False):
workflow = getToolByName(self.context, "portal_workflow")
items = BikaListingView.folderitems(self)
mtool = getToolByName(self.context, 'portal_membership')
member = mtool.getAuthenticatedMember()
translate = self.context.translate
roles = member.getRoles()
hideclientlink = 'RegulatoryInspector' in roles \
and 'Manager' not in roles \
and 'LabManager' not in roles \
and 'LabClerk' not in roles
for x in range(len(items)):
if not items[x].has_key('obj'): continue
obj = items[x]['obj']
items[x]['replace']['getSampleID'] = "<a href='%s'>%s</a>" % \
(items[x]['url'], obj.getSampleID())
items[x]['replace']['Requests'] = ",".join(
["<a href='%s'>%s</a>" % (o.absolute_url(), o.Title())
for o in obj.getAnalysisRequests()])
items[x]['Client'] = obj.aq_parent.Title()
if hideclientlink == False:
items[x]['replace']['Client'] = "<a href='%s'>%s</a>" % \
(obj.aq_parent.absolute_url(), obj.aq_parent.Title())
items[x]['Creator'] = self.user_fullname(obj.Creator())
items[x]['DateReceived'] = self.ulocalized_time(obj.getDateReceived())
deviation = obj.getSamplingDeviation()
items[x]['SamplingDeviation'] = deviation and deviation.Title() or ''
items[x]['getStorageLocation'] = obj.getStorageLocation() and obj.getStorageLocation().Title() or ''
items[x]['AdHoc'] = obj.getAdHoc() and True or ''
items[x]['Created'] = self.ulocalized_time(obj.created())
samplingdate = obj.getSamplingDate()
items[x]['getSamplingDate'] = self.ulocalized_time(samplingdate, long_format=1)
after_icons = ''
if obj.getSampleType().getHazardous():
after_icons += "<img title='%s' " \
"src='%s/++resource++bika.lims.images/hazardous.png'>" % \
(t(_("Hazardous")),
self.portal_url)
if obj.getSamplingDate() > DateTime():
after_icons += "<img title='%s' " \
"src='%s/++resource++bika.lims.images/calendar.png' >" % \
(t(_("Future dated sample")),
self.portal_url)
if after_icons:
items[x]['after']['getSampleID'] = after_icons
SamplingWorkflowEnabled =\
self.context.bika_setup.getSamplingWorkflowEnabled()
if not samplingdate > DateTime() \
and SamplingWorkflowEnabled:
datesampled = self.ulocalized_time(obj.getDateSampled())
if not datesampled:
datesampled = self.ulocalized_time(DateTime())
items[x]['class']['getDateSampled'] = 'provisional'
sampler = obj.getSampler().strip()
if sampler:
items[x]['replace']['getSampler'] = self.user_fullname(sampler)
if 'Sampler' in member.getRoles() and not sampler:
sampler = member.id
items[x]['class']['getSampler'] = 'provisional'
else:
datesampled = ''
sampler = ''
items[x]['getDateSampled'] = datesampled
items[x]['getSampler'] = sampler
# sampling workflow - inline edits for Sampler and Date Sampled
checkPermission = self.context.portal_membership.checkPermission
state = workflow.getInfoFor(obj, 'review_state')
if state == 'to_be_sampled' \
and checkPermission(SampleSample, obj) \
and not samplingdate > DateTime():
items[x]['required'] = ['getSampler', 'getDateSampled']
items[x]['allow_edit'] = ['getSampler', 'getDateSampled']
samplers = getUsers(obj, ['Sampler', 'LabManager', 'Manager'])
getAuthenticatedMember = self.context.portal_membership.getAuthenticatedMember
username = getAuthenticatedMember().getUserName()
users = [({'ResultValue': u, 'ResultText': samplers.getValue(u)})
for u in samplers]
items[x]['choices'] = {'getSampler': users}
Sampler = sampler and sampler or \
(username in samplers.keys() and username) or ''
items[x]['getSampler'] = Sampler
# These don't exist on samples
# the columns exist just to set "preserve" transition from lists.
# XXX This should be a list of preservers...
items[x]['getPreserver'] = ''
items[x]['getDatePreserved'] = ''
# inline edits for Preserver and Date Preserved
checkPermission = self.context.portal_membership.checkPermission
if checkPermission(PreserveSample, obj):
items[x]['required'] = ['getPreserver', 'getDatePreserved']
items[x]['allow_edit'] = ['getPreserver', 'getDatePreserved']
preservers = getUsers(obj, ['Preserver', 'LabManager', 'Manager'])
getAuthenticatedMember = self.context.portal_membership.getAuthenticatedMember
username = getAuthenticatedMember().getUserName()
users = [({'ResultValue': u, 'ResultText': preservers.getValue(u)})
for u in preservers]
items[x]['choices'] = {'getPreserver': users}
preserver = username in preservers.keys() and username or ''
items[x]['getPreserver'] = preserver
items[x]['getDatePreserved'] = self.ulocalized_time(DateTime())
items[x]['class']['getPreserver'] = 'provisional'
items[x]['class']['getDatePreserved'] = 'provisional'
# Hide Preservation/Sampling workflow actions if the edit columns
# are not displayed.
toggle_cols = self.get_toggle_cols()
new_states = []
for i,state in enumerate(self.review_states):
if state['id'] == self.review_state:
if 'getSampler' not in toggle_cols \
or 'getDateSampled' not in toggle_cols:
if 'hide_transitions' in state:
state['hide_transitions'].append('sample')
else:
state['hide_transitions'] = ['sample',]
if 'getPreserver' not in toggle_cols \
or 'getDatePreserved' not in toggle_cols:
if 'hide_transitions' in state:
state['hide_transitions'].append('preserve')
else:
state['hide_transitions'] = ['preserve',]
new_states.append(state)
self.review_states = new_states
return items
def __init__(self, context, request):
super(FolderView, self).__init__(context, request)
self.catalog = CATALOG_WORKSHEET_LISTING
self.contentFilter = {
'review_state': ['open', 'to_be_verified', 'verified', 'rejected'],
'sort_on': 'CreationDate',
'sort_order': 'reverse'
}
self.context_actions = {
_('Add'): {
'url': 'worksheet_add',
'icon': '++resource++bika.lims.images/add.png',
'class': 'worksheet_add'
}
}
self.show_table_only = False
self.show_sort_column = False
self.show_select_row = False
self.show_select_all_checkbox = True
self.show_select_column = True
self.restrict_results = False
self.wf = getToolByName(self, 'portal_workflow')
self.rc = getToolByName(self, REFERENCE_CATALOG)
self.pm = getToolByName(self.context, "portal_membership")
request.set('disable_border', 1)
self.icon = self.portal_url + "/++resource++bika.lims.images/worksheet_big.png"
self.title = self.context.translate(_("Worksheets"))
self.description = ""
# this is a property of self, because self.getAnalysts returns it
self.analysts = getUsers(self, ['Manager', 'LabManager', 'Analyst'])
self.analysts = self.analysts.sortedByKey()
self.allowed_department_filtering = \
self.context.bika_setup.getAllowDepartmentFiltering()
self.columns = {
'Title': {
'title': _('Worksheet'),
'index': 'getId'
},
'Analyst': {
'title': _('Analyst'),
'index': 'getAnalyst',
},
'Template': {
'title': _('Template'),
'attr': 'getWorksheetTemplateTitle',
'replace_url': 'getWorksheetTemplateURL',
},
'NumRegularSamples': {
'title': _('Samples'),
'sortable': False,
},
'NumQCAnalyses': {
'title': _('QC Analyses'),
'sortable': False,
},
'NumRegularAnalyses': {
'title': _('Routine Analyses'),
'sortable': False,
},
'CreationDate': {
'title': PMF('Date Created'),
'index': 'created'
},
'state_title': {
'title': _('State'),
'index': 'review_state',
'attr': 'state_title'
},
}
self.review_states = [
{
'id':
'default',
'title':
_('All'),
'contentFilter': {
'review_state': ['open', 'to_be_verified', 'verified'],
'sort_on': 'CreationDate',
'sort_order': 'reverse'
},
'transitions': [{
'id': 'retract'
}, {
'id': 'verify'
}, {
'id': 'reject'
}],
'columns': [
'Title', 'Analyst', 'Template', 'NumRegularSamples',
'NumQCAnalyses', 'NumRegularAnalyses', 'CreationDate',
'state_title'
]
},
# getAuthenticatedMember does not work in __init__
# so 'mine' is configured further in 'folderitems' below.
{
'id':
'mine',
'title':
_('Mine'),
'contentFilter': {
'review_state':
['open', 'to_be_verified', 'verified', 'rejected'],
'sort_on':
'CreationDate',
'sort_order':
'reverse'
},
'transitions': [{
'id': 'retract'
}, {
'id': 'verify'
}, {
'id': 'reject'
}],
'columns': [
'Title', 'Analyst', 'Template', 'NumRegularSamples',
'NumQCAnalyses', 'NumRegularAnalyses', 'CreationDate',
'state_title'
]
},
{
'id':
'open',
'title':
_('Open'),
'contentFilter': {
'review_state': 'open',
'sort_on': 'CreationDate',
'sort_order': 'reverse'
},
'transitions': [],
'columns': [
'Title', 'Analyst', 'Template', 'NumRegularSamples',
'NumQCAnalyses', 'NumRegularAnalyses', 'CreationDate',
'state_title'
]
},
{
'id':
'to_be_verified',
'title':
_('To be verified'),
'contentFilter': {
'review_state': 'to_be_verified',
'sort_on': 'CreationDate',
'sort_order': 'reverse'
},
'transitions': [{
'id': 'retract'
}, {
'id': 'verify'
}, {
'id': 'reject'
}],
'columns': [
'Title', 'Analyst', 'Template', 'NumRegularSamples',
'NumQCAnalyses', 'NumRegularAnalyses', 'CreationDate',
'state_title'
]
},
{
'id':
'verified',
'title':
_('Verified'),
'contentFilter': {
'review_state': 'verified',
'sort_on': 'CreationDate',
'sort_order': 'reverse'
},
'transitions': [],
'columns': [
'Title', 'Analyst', 'Template', 'NumRegularSamples',
'NumQCAnalyses', 'NumRegularAnalyses', 'CreationDate',
'state_title'
]
},
]
def getAnalysts(self):
"""
This function returns a displaylist with the available analysts
"""
analysts = getUsers(self, ['Manager', 'LabManager', 'Analyst'])
return analysts.sortedByKey()
def __init__(self, context, request):
super(FolderView, self).__init__(context, request)
self.catalog = CATALOG_WORKSHEET_LISTING
self.contentFilter = {
"review_state": ["open", "to_be_verified", "verified", "rejected"],
"sort_on": "created",
"sort_order": "reverse"
}
self.title = self.context.translate(_("Worksheets"))
self.description = ""
self.icon = "{}/{}".format(
self.portal_url, "++resource++bika.lims.images/worksheet_big.png")
self.context_actions = {
_("Add"): {
"url": "createObject?type_name=InstrumentMaintenanceTask",
"icon": "++resource++bika.lims.images/add.png"
}
}
self.context_actions = {
_("Add"): {
"url": "worksheet_add",
"icon": "++resource++bika.lims.images/add.png",
"class": "worksheet_add"
}
}
self.show_select_column = True
self.show_select_all_checkbox = True
self.filter_by_user = False
self.selected_state = ""
self.analyst_choices = []
self.can_reassign = False
self.can_manage = False
self.rc = getToolByName(self, REFERENCE_CATALOG)
# this is a property of self, because self.getAnalysts returns it
self.analysts = getUsers(self, ["Manager", "LabManager", "Analyst"])
self.analysts = self.analysts.sortedByValue()
self.analyst_choices = []
for a in self.analysts:
self.analyst_choices.append({
"ResultValue":
a,
"ResultText":
self.analysts.getValue(a),
})
self.columns = collections.OrderedDict((
("getProgressPercentage", {
"title": _("Progress")
}),
("Title", {
"title": _("Worksheet"),
"index": "getId"
}),
("Analyst", {
"title": _("Analyst"),
"index": "getAnalyst"
}),
("getWorksheetTemplateTitle", {
"title": _("Template"),
"replace_url": "getWorksheetTemplateURL"
}),
("getNumberOfRegularSamples", {
"title": _("Samples")
}),
("getNumberOfQCAnalyses", {
"title": _("QC Analyses")
}),
("getNumberOfRegularAnalyses", {
"title": _("Routine Analyses")
}),
("CreationDate", {
"title": _("Created"),
"index": "created"
}),
("state_title", {
"title": _("State"),
"index": "review_state",
"attr": "state_title"
}),
))
self.review_states = [
{
"id": "default",
"title": _("Active"),
"contentFilter": {
"review_state": [
"open",
"to_be_verified",
],
"sort_on": "CreationDate",
"sort_order": "reverse"
},
"transitions": [],
"custom_transitions": [],
"columns": self.columns.keys(),
},
{
"id": "open",
"title": _("Open"),
"contentFilter": {
"review_state": "open",
"sort_on": "CreationDate",
"sort_order": "reverse"
},
"transitions": [],
"custom_transitions": [],
"columns": self.columns.keys(),
},
{
"id": "to_be_verified",
"title": _("To be verified"),
"contentFilter": {
"review_state": "to_be_verified",
"sort_on": "CreationDate",
"sort_order": "reverse"
},
"transitions": [],
"custom_transitions": [],
"columns": self.columns.keys()
},
{
"id": "verified",
"title": _("Verified"),
"contentFilter": {
"review_state": "verified",
"sort_on": "CreationDate",
"sort_order": "reverse"
},
"transitions": [],
"custom_transitions": [],
"columns": self.columns.keys(),
},
{
"id": "all",
"title": _("All"),
"contentFilter": {
"review_state": [
"open",
"to_be_verified",
"verified",
"rejected",
],
"sort_on":
"CreationDate",
"sort_order":
"reverse"
},
"transitions": [],
"custom_transitions": [],
"columns": self.columns.keys(),
},
{
# getAuthenticatedMember does not work in __init__ so "mine" is
# configured further in "folderitems" below.
"id": "mine",
"title": _("Mine"),
"contentFilter": {
"review_state":
["open", "to_be_verified", "verified", "rejected"],
"sort_on":
"CreationDate",
"sort_order":
"reverse"
},
"transitions": [],
"custom_transitions": [],
"columns": self.columns.keys(),
}
]
def select_user(self, allow_blank=True, style=None):
self.style = style
self.allow_blank = allow_blank
self.users = getUsers(self.context, None, allow_blank)
return self.select_user_pt()
def folderitem(self, obj, item, index):
workflow = getToolByName(self.context, "portal_workflow")
mtool = getToolByName(self.context, 'portal_membership')
member = mtool.getAuthenticatedMember()
translate = self.context.translate
roles = member.getRoles()
hideclientlink = 'RegulatoryInspector' in roles \
and 'Manager' not in roles \
and 'LabManager' not in roles \
and 'LabClerk' not in roles
if not item.has_key('obj'):
return item
obj = item['obj']
item['replace']['getSampleID'] = "<a href='%s'>%s</a>" % \
(item['url'], obj.getSampleID())
item['replace']['Requests'] = ",".join(
["<a href='%s'>%s</a>" % (o.absolute_url(), o.Title())
for o in obj.getAnalysisRequests()])
item['Client'] = obj.aq_parent.Title()
if hideclientlink == False:
item['replace']['Client'] = "<a href='%s'>%s</a>" % \
(obj.aq_parent.absolute_url(), obj.aq_parent.Title())
item['Creator'] = self.user_fullname(obj.Creator())
item['DateReceived'] = self.ulocalized_time(obj.getDateReceived())
deviation = obj.getSamplingDeviation()
item['SamplingDeviation'] = deviation and deviation.Title() or ''
item['getStorageLocation'] = obj.getStorageLocation() and obj.getStorageLocation().Title() or ''
item['AdHoc'] = obj.getAdHoc() and True or ''
item['Created'] = self.ulocalized_time(obj.created())
sd = obj.getSamplingDate()
item['SamplingDate'] = \
self.ulocalized_time(sd, long_format=1) if sd else ''
after_icons = ''
if obj.getSampleType().getHazardous():
after_icons += "<img title='%s' " \
"src='%s/++resource++bika.lims.images/hazardous.png'>" % \
(t(_("Hazardous")),
self.portal_url)
if sd and sd > DateTime():
after_icons += "<img title='%s' " \
"src='%s/++resource++bika.lims.images/calendar.png' >" % \
(t(_("Future dated sample")),
self.portal_url)
if after_icons:
item['after']['getSampleID'] = after_icons
if obj.getSamplingWorkflowEnabled():
datesampled = self.ulocalized_time(
obj.getDateSampled(), long_format=True)
if not datesampled:
datesampled = self.ulocalized_time(
DateTime(), long_format=True)
item['class']['DateSampled'] = 'provisional'
sampler = obj.getSampler().strip()
if sampler:
item['replace']['getSampler'] = self.user_fullname(sampler)
if 'Sampler' in member.getRoles() and not sampler:
sampler = member.id
item['class']['getSampler'] = 'provisional'
else:
datesampled = self.ulocalized_time(obj.getDateSampled(), long_format=True)
sampler = ''
item['DateSampled'] = datesampled
item['getSampler'] = sampler
# sampling workflow - inline edits for Sampler, Date Sampled and
# Scheduled Sampling Sampler
checkPermission = self.context.portal_membership.checkPermission
state = workflow.getInfoFor(obj, 'review_state')
if state in ['to_be_sampled', 'scheduled_sampling']:
item['required'] = []
item['allow_edit'] = []
item['choices'] = {}
samplers = getUsers(obj, ['Sampler', 'LabManager', 'Manager'])
users = [(
{'ResultValue': u, 'ResultText': samplers.getValue(u)})
for u in samplers]
# both situations
if checkPermission(SampleSample, obj) or\
self._schedule_sampling_permissions():
item['required'].append('getSampler')
item['allow_edit'].append('getSampler')
item['choices']['getSampler'] = users
# sampling permissions
if checkPermission(SampleSample, obj):
getAuthenticatedMember = self.context.\
portal_membership.getAuthenticatedMember
username = getAuthenticatedMember().getUserName()
Sampler = sampler and sampler or \
(username in samplers.keys() and username) or ''
item['required'].append('DateSampled')
item['allow_edit'].append('DateSampled')
item['getSampler'] = Sampler
# coordinator permissions
if self._schedule_sampling_permissions():
item['required'].append('SamplingDate')
item['allow_edit'].append('SamplingDate')
item['required'].append('getScheduledSamplingSampler')
item['allow_edit'].append(
'getScheduledSamplingSampler')
item['choices']['getScheduledSamplingSampler'] = users
# These don't exist on samples
# the columns exist just to set "preserve" transition from lists.
# XXX This should be a list of preservers...
item['getPreserver'] = ''
item['getDatePreserved'] = ''
# Here we are defining the name of the content field represented by
# the column
item['field']['getSampler'] = 'Sampler'
item['field']['getScheduledSamplingSampler'] =\
'ScheduledSamplingSampler'
# inline edits for Preserver and Date Preserved
checkPermission = self.context.portal_membership.checkPermission
if checkPermission(PreserveSample, obj):
item['required'] = ['getPreserver', 'getDatePreserved']
item['allow_edit'] = ['getPreserver', 'getDatePreserved']
preservers = getUsers(obj, ['Preserver', 'LabManager', 'Manager'])
getAuthenticatedMember = self.context.portal_membership.getAuthenticatedMember
username = getAuthenticatedMember().getUserName()
users = [({'ResultValue': u, 'ResultText': preservers.getValue(u)})
for u in preservers]
item['choices'] = {'getPreserver': users}
preserver = username in preservers.keys() and username or ''
item['getPreserver'] = preserver
item['getDatePreserved'] = self.ulocalized_time(DateTime())
item['class']['getPreserver'] = 'provisional'
item['class']['getDatePreserved'] = 'provisional'
return item
def folderitem(self, obj, item, index):
# Additional info from AnalysisRequest to be added in the item generated
# by default by bikalisting.
# Call the folderitem method from the base class
item = BikaListingView.folderitem(self, obj, item, index)
if not item:
return None
member = self.mtool.getAuthenticatedMember()
roles = member.getRoles()
hideclientlink = 'RegulatoryInspector' in roles \
and 'Manager' not in roles \
and 'LabManager' not in roles \
and 'LabClerk' not in roles
sample = obj.getSample()
url = obj.absolute_url()
if getSecurityManager().checkPermission(EditResults, obj):
url += "/manage_results"
item['Client'] = obj.aq_parent.Title()
if (hideclientlink == False):
item['replace']['Client'] = "<a href='%s'>%s</a>" % \
(obj.aq_parent.absolute_url(), obj.aq_parent.Title())
item['Creator'] = self.user_fullname(obj.Creator())
item['getRequestID'] = obj.getRequestID()
item['replace']['getRequestID'] = "<a href='%s'>%s</a>" % \
(url, item['getRequestID'])
item['getSample'] = sample
item['replace']['getSample'] = \
"<a href='%s'>%s</a>" % (sample.absolute_url(), sample.Title())
item['replace']['getProfilesTitle'] = ", ".join(
[p.Title() for p in obj.getProfiles()])
analysesnum = obj.getAnalysesNum()
if analysesnum:
item['getAnalysesNum'] = str(analysesnum[0]) + '/' + str(analysesnum[1])
else:
item['getAnalysesNum'] = ''
batch = obj.getBatch()
if batch:
item['BatchID'] = batch.getBatchID()
item['replace']['BatchID'] = "<a href='%s'>%s</a>" % \
(batch.absolute_url(), item['BatchID'])
else:
item['BatchID'] = ''
val = obj.Schema().getField('SubGroup').get(obj)
item['SubGroup'] = val.Title() if val else ''
samplingdate = obj.getSample().getSamplingDate()
item['SamplingDate'] = self.ulocalized_time(samplingdate, long_format=1)
item['getDateReceived'] = self.ulocalized_time(obj.getDateReceived())
item['getDatePublished'] = self.ulocalized_time(obj.getDatePublished())
item['getDateVerified'] = getTransitionDate(obj, 'verify')
deviation = sample.getSamplingDeviation()
item['SamplingDeviation'] = deviation and deviation.Title() or ''
priority = obj.getPriority()
item['Priority'] = '' # priority.Title()
item['getStorageLocation'] = sample.getStorageLocation() and sample.getStorageLocation().Title() or ''
item['AdHoc'] = sample.getAdHoc() and True or ''
after_icons = ""
state = self.workflow.getInfoFor(obj, 'worksheetanalysis_review_state')
if state == 'assigned':
after_icons += "<img src='%s/++resource++bika.lims.images/worksheet.png' title='%s'/>" % \
(self.portal_url, t(_("All analyses assigned")))
if self.workflow.getInfoFor(obj, 'review_state') == 'invalid':
after_icons += "<img src='%s/++resource++bika.lims.images/delete.png' title='%s'/>" % \
(self.portal_url, t(_("Results have been withdrawn")))
if obj.getLate():
after_icons += "<img src='%s/++resource++bika.lims.images/late.png' title='%s'>" % \
(self.portal_url, t(_("Late Analyses")))
if samplingdate > DateTime():
after_icons += "<img src='%s/++resource++bika.lims.images/calendar.png' title='%s'>" % \
(self.portal_url, t(_("Future dated sample")))
if obj.getInvoiceExclude():
after_icons += "<img src='%s/++resource++bika.lims.images/invoice_exclude.png' title='%s'>" % \
(self.portal_url, t(_("Exclude from invoice")))
if sample.getSampleType().getHazardous():
after_icons += "<img src='%s/++resource++bika.lims.images/hazardous.png' title='%s'>" % \
(self.portal_url, t(_("Hazardous")))
if after_icons:
item['after']['getRequestID'] = after_icons
item['Created'] = self.ulocalized_time(obj.created())
contact = obj.getContact()
if contact:
item['ClientContact'] = contact.Title()
item['replace']['ClientContact'] = "<a href='%s'>%s</a>" % \
(contact.absolute_url(), contact.Title())
else:
item['ClientContact'] = ""
SamplingWorkflowEnabled = sample.getSamplingWorkflowEnabled()
if SamplingWorkflowEnabled and not samplingdate > DateTime():
datesampled = self.ulocalized_time(sample.getDateSampled())
if not datesampled:
datesampled = self.ulocalized_time(
DateTime(),
long_format=1)
item['class']['getDateSampled'] = 'provisional'
sampler = sample.getSampler().strip()
if sampler:
item['replace']['getSampler'] = self.user_fullname(sampler)
if 'Sampler' in member.getRoles() and not sampler:
sampler = member.id
item['class']['getSampler'] = 'provisional'
else:
datesampled = ''
sampler = ''
item['getDateSampled'] = datesampled
item['getSampler'] = sampler
# sampling workflow - inline edits for Sampler and Date Sampled
checkPermission = self.context.portal_membership.checkPermission
state = self.workflow.getInfoFor(obj, 'review_state')
if state == 'to_be_sampled' \
and checkPermission(SampleSample, obj) \
and not samplingdate > DateTime():
item['required'] = ['getSampler', 'getDateSampled']
item['allow_edit'] = ['getSampler', 'getDateSampled']
samplers = getUsers(sample, ['Sampler', 'LabManager', 'Manager'])
username = member.getUserName()
users = [({'ResultValue': u, 'ResultText': samplers.getValue(u)})
for u in samplers]
item['choices'] = {'getSampler': users}
Sampler = sampler and sampler or \
(username in samplers.keys() and username) or ''
item['getSampler'] = Sampler
# These don't exist on ARs
# XXX This should be a list of preservers...
item['getPreserver'] = ''
item['getDatePreserved'] = ''
# inline edits for Preserver and Date Preserved
checkPermission = self.context.portal_membership.checkPermission
if checkPermission(PreserveSample, obj):
item['required'] = ['getPreserver', 'getDatePreserved']
item['allow_edit'] = ['getPreserver', 'getDatePreserved']
preservers = getUsers(obj, ['Preserver', 'LabManager', 'Manager'])
username = member.getUserName()
users = [({'ResultValue': u, 'ResultText': preservers.getValue(u)})
for u in preservers]
item['choices'] = {'getPreserver': users}
preserver = username in preservers.keys() and username or ''
item['getPreserver'] = preserver
item['getDatePreserved'] = self.ulocalized_time(
DateTime(),
long_format=1)
item['class']['getPreserver'] = 'provisional'
item['class']['getDatePreserved'] = 'provisional'
# Submitting user may not verify results
if item['review_state'] == 'to_be_verified' and \
not checkPermission(VerifyOwnResults, obj):
self_submitted = False
try:
review_history = list(self.workflow.getInfoFor(obj, 'review_history'))
review_history.reverse()
for event in review_history:
if event.get('action') == 'submit':
if event.get('actor') == member.getId():
self_submitted = True
break
if self_submitted:
item['after']['state_title'] = \
"<img src='++resource++bika.lims.images/submitted-by-current-user.png' title='%s'/>" % \
t(_("Cannot verify: Submitted by current user"))
except Exception:
pass
return item
def folderitems(self, full_objects = False):
items = BikaListingView.folderitems(self)
props = getToolByName(self.context, 'portal_properties').bika_properties
datepicker_format = props.getProperty('datepicker_format')
bsc = getToolByName(self.context, 'bika_setup_catalog')
containers = [({'ResultValue':o.UID,
'ResultText':o.title})
for o in bsc(portal_type="Container",
inactive_state="active")]
preservations = [({'ResultValue':o.UID,
'ResultText':o.title})
for o in bsc(portal_type="Preservation",
inactive_state="active")]
for x in range(len(items)):
if not items[x].has_key('obj'): continue
obj = items[x]['obj']
items[x]['PartTitle'] = obj.getId()
container = obj.getContainer()
if self.allow_edit:
items[x]['getContainer'] = container and container.UID() or ''
else:
items[x]['getContainer'] = container and container.Title() or ''
preservation = obj.getPreservation()
if self.allow_edit:
items[x]['getPreservation'] = preservation and preservation.UID() or ''
else:
items[x]['getPreservation'] = preservation and preservation.Title() or ''
## sampler = obj.getSampler().strip()
## items[x]['getSampler'] = \
## sampler and pretty_user_name_or_id(self.context, sampler) or ''
## datesampled = obj.getDateSampled()
## items[x]['getDateSampled'] = \
## datesampled and TimeOrDate(self.context, datesampled) or ''
preserver = obj.getPreserver().strip()
items[x]['getPreserver'] = \
preserver and pretty_user_name_or_id(self.context, preserver) or ''
datepreserved = obj.getDatePreserved()
items[x]['getDatePreserved'] = \
datepreserved and TimeOrDate(self.context, datepreserved) or ''
disposaldate = obj.getDisposalDate()
items[x]['getDisposalDate'] = \
disposaldate and TimeOrDate(self.context, disposaldate) or ''
samplingdate = obj.getSamplingDate()
# inline edits for Container and Preservation
items[x]['allow_edit'] = ['getContainer', 'getPreservation']
items[x]['choices']['getPreservation'] = preservations
items[x]['choices']['getContainer'] = containers
# inline edits for Sampler and Date Sampled
## checkPermission = self.context.portal_membership.checkPermission
## if checkPermission(SampleSample, obj) \
## and not samplingdate > DateTime():
## items[x]['required'] += ['getSampler', 'getDateSampled']
## items[x]['allow_edit'] += ['getSampler', 'getDateSampled']
## samplers = getUsers(obj, ['Sampler', 'LabManager', 'Manager'])
## getAuthenticatedMember = obj.portal_membership.getAuthenticatedMember
## username = getAuthenticatedMember().getUserName()
## users = [({'ResultValue': u, 'ResultText': samplers.getValue(u)})
## for u in samplers]
## items[x]['choices']['getSampler'] = users
## items[x]['getSampler'] = sampler and sampler or \
## (username in samplers.keys() and username) or ''
## items[x]['getDateSampled'] = items[x]['getDateSampled'] \
## or DateTime().strftime(datepicker_format)
## items[x]['class']['getSampler'] = 'provisional'
## items[x]['class']['getDateSampled'] = 'provisional'
# inline edits for Preserver and Date Preserved
checkPermission = self.context.portal_membership.checkPermission
if checkPermission(PreserveSample, obj):
items[x]['required'] += ['getPreserver', 'getDatePreserved']
items[x]['allow_edit'] += ['getPreserver', 'getDatePreserved']
preservers = getUsers(obj, ['Preserver', 'LabManager', 'Manager'])
getAuthenticatedMember = obj.portal_membership.getAuthenticatedMember
username = getAuthenticatedMember().getUserName()
users = [({'ResultValue': u, 'ResultText': preservers.getValue(u)})
for u in preservers]
items[x]['choices']['getPreserver'] = users
items[x]['getPreserver'] = preserver and preserver or \
(username in preservers.keys() and username) or ''
items[x]['getDatePreserved'] = items[x]['getDatePreserved'] \
or DateTime().strftime(datepicker_format)
items[x]['class']['getPreserver'] = 'provisional'
items[x]['class']['getDatePreserved'] = 'provisional'
return items
def folderitems(self, full_objects=False):
items = BikaListingView.folderitems(self)
bsc = getToolByName(self.context, 'bika_setup_catalog')
containers = [({
'ResultValue': o.UID,
'ResultText': o.title
}) for o in bsc(portal_type="Container", inactive_state="active")]
preservations = [({
'ResultValue': o.UID,
'ResultText': o.title
}) for o in bsc(portal_type="Preservation", inactive_state="active")]
for x in range(len(items)):
if not items[x].has_key('obj'): continue
obj = items[x]['obj']
items[x]['PartTitle'] = obj.getId()
container = obj.getContainer()
if self.allow_edit:
items[x]['getContainer'] = container and container.UID() or ''
else:
items[x]['getContainer'] = container and container.Title(
) or ''
preservation = obj.getPreservation()
if self.allow_edit:
items[
x]['getPreservation'] = preservation and preservation.UID(
) or ''
else:
items[x][
'getPreservation'] = preservation and preservation.Title(
) or ''
## sampler = obj.getSampler().strip()
## items[x]['getSampler'] = \
## sampler and self.user_fullname(sampler) or ''
## datesampled = obj.getDateSampled()
## items[x]['getDateSampled'] = \
## datesampled and self.ulocalized_time(datesampled) or ''
preserver = obj.getPreserver().strip()
items[x]['getPreserver'] = \
preserver and self.user_fullname(preserver) or ''
datepreserved = obj.getDatePreserved()
items[x]['getDatePreserved'] = \
datepreserved and self.ulocalized_time(datepreserved) or ''
disposaldate = obj.getDisposalDate()
items[x]['getDisposalDate'] = \
disposaldate and self.ulocalized_time(disposaldate) or ''
samplingdate = obj.getSamplingDate()
# inline edits for Container and Preservation
items[x]['allow_edit'] = ['getContainer', 'getPreservation']
items[x]['choices']['getPreservation'] = preservations
items[x]['choices']['getContainer'] = containers
# inline edits for Sampler and Date Sampled
## checkPermission = self.context.portal_membership.checkPermission
## if checkPermission(SampleSample, obj) \
## and not samplingdate > DateTime():
## items[x]['required'] += ['getSampler', 'getDateSampled']
## items[x]['allow_edit'] += ['getSampler', 'getDateSampled']
## samplers = getUsers(obj, ['Sampler', 'LabManager', 'Manager'])
## getAuthenticatedMember = obj.portal_membership.getAuthenticatedMember
## username = getAuthenticatedMember().getUserName()
## users = [({'ResultValue': u, 'ResultText': samplers.getValue(u)})
## for u in samplers]
## items[x]['choices']['getSampler'] = users
## items[x]['getSampler'] = sampler and sampler or \
## (username in samplers.keys() and username) or ''
## items[x]['getDateSampled'] = items[x]['getDateSampled'] \
## or DateTime().strftime(self.date_format_short)
## items[x]['class']['getSampler'] = 'provisional'
## items[x]['class']['getDateSampled'] = 'provisional'
# inline edits for Preserver and Date Preserved
checkPermission = self.context.portal_membership.checkPermission
if checkPermission(PreserveSample, obj):
items[x]['required'] += ['getPreserver', 'getDatePreserved']
items[x]['allow_edit'] += ['getPreserver', 'getDatePreserved']
preservers = getUsers(obj,
['Preserver', 'LabManager', 'Manager'])
getAuthenticatedMember = obj.portal_membership.getAuthenticatedMember
username = getAuthenticatedMember().getUserName()
users = [({
'ResultValue': u,
'ResultText': preservers.getValue(u)
}) for u in preservers]
items[x]['choices']['getPreserver'] = users
items[x]['getPreserver'] = preserver and preserver or \
(username in preservers.keys() and username) or ''
items[x]['getDatePreserved'] = items[x]['getDatePreserved'] \
or DateTime().strftime(self.date_format_short)
items[x]['class']['getPreserver'] = 'provisional'
items[x]['class']['getDatePreserved'] = 'provisional'
return items
def __call__(self):
form = self.request.form
bc = getToolByName(self.context, 'bika_catalog')
bsc = getToolByName(self.context, 'bika_setup_catalog')
checkPermission = self.context.portal_membership.checkPermission
getAuthenticatedMember = self.context.portal_membership.getAuthenticatedMember
workflow = getToolByName(self.context, 'portal_workflow')
ars = self.context.getAnalysisRequests()
props = getToolByName(self.context, 'portal_properties').bika_properties
datepicker_format = props.getProperty('datepicker_format')
sample = self.context
## Create header_table data rows
ar_links = ", ".join(
["<a href='%s'>%s</a>"%(ar.absolute_url(), ar.Title())
for ar in ars])
sp = self.context.getSamplePoint()
st = self.context.getSampleType()
if workflow.getInfoFor(self.context, 'cancellation_state') == "cancelled":
allow_sample_edit = False
else:
edit_states = ['to_be_sampled', 'to_be_preserved', 'sample_due']
allow_sample_edit = checkPermission(ManageSamples, self.context) \
and workflow.getInfoFor(self.context, 'review_state') in edit_states
SamplingWorkflowEnabled =\
self.context.bika_setup.getSamplingWorkflowEnabled()
samplers = getUsers(sample, ['Sampler', 'LabManager', 'Manager'])
self.header_columns = 3
self.header_rows = [
{'id': 'ClientReference',
'title': _('Client Reference'),
'allow_edit': self.allow_edit,
'value': self.context.getClientReference(),
'condition':True,
'type': 'text'},
{'id': 'ClientSampleID',
'title': _('Client SID'),
'allow_edit': self.allow_edit,
'value': self.context.getClientSampleID(),
'condition':True,
'type': 'text'},
{'id': 'Requests',
'title': _('Requests'),
'allow_edit': False,
'value': ar_links,
'condition':True,
'type': 'text'},
{'id': 'SampleType',
'title': _('Sample Type'),
'allow_edit': self.allow_edit and allow_sample_edit,
'value': st and st.Title() or '',
'condition':True,
'type': 'text',
'required': True},
{'id': 'SamplePoint',
'title': _('Sample Point'),
'allow_edit': self.allow_edit and allow_sample_edit,
'value': sp and sp.Title() or '',
'condition':True,
'type': 'text'},
{'id': 'Composite',
'title': _('Composite'),
'allow_edit': self.allow_edit and allow_sample_edit,
'value': self.context.getComposite(),
'condition':True,
'type': 'boolean'},
{'id': 'Creator',
'title': PMF('Creator'),
'allow_edit': False,
'value': pretty_user_name_or_id(self.context, self.context.Creator()),
'condition':True,
'type': 'text'},
{'id': 'DateCreated',
'title': PMF('Date Created'),
'allow_edit': False,
'value': self.context.created(),
'formatted_value': TimeOrDate(self.context, self.context.created()),
'condition':True,
'type': 'text'},
{'id': 'SamplingDate',
'title': _('Sampling Date'),
'allow_edit': self.allow_edit and allow_sample_edit,
'value': self.context.getSamplingDate().strftime(datepicker_format),
'formatted_value': TimeOrDate(self.context, self.context.getSamplingDate()),
'condition':True,
'class': 'datepicker',
'type': 'text'},
{'id': 'DateSampled',
'title': _('Date Sampled'),
'allow_edit': self.allow_edit and allow_sample_edit,
'value': sample.getDateSampled() and sample.getDateSampled().strftime(datepicker_format) or '',
'formatted_value': sample.getDateSampled() and TimeOrDate(self.context, sample.getDateSampled()) or '',
'condition':SamplingWorkflowEnabled,
'class': 'datepicker',
'type': 'text',
'required': True},
{'id': 'Sampler',
'title': _('Sampler'),
'allow_edit': self.allow_edit and allow_sample_edit,
'value': sample.getSampler(),
'formatted_value': sample.getSampler(),
'condition':SamplingWorkflowEnabled,
'vocabulary': samplers,
'type': 'choices',
'required': True},
{'id': 'DateReceived',
'title': _('Date Received'),
'allow_edit': False,
'value': self.context.getDateReceived(),
'formatted_value': TimeOrDate(self.context, self.context.getDateReceived()),
'condition':True,
'type': 'text'},
{'id': 'DateExpired',
'title': _('Date Expired'),
'allow_edit': False,
'value': self.context.getDateExpired(),
'formatted_value': TimeOrDate(self.context, self.context.getDateExpired()),
'condition':True,
'type': 'text'},
{'id': 'DisposalDate',
'title': _('Disposal Date'),
'allow_edit': False,
'value': self.context.getDisposalDate(),
'formatted_value': TimeOrDate(self.context, self.context.getDisposalDate()),
'condition':True,
'type': 'text'},
{'id': 'DateDisposed',
'title': _('Date Disposed'),
'allow_edit': False,
'value': self.context.getDateDisposed(),
'formatted_value': TimeOrDate(self.context, self.context.getDateDisposed()),
'condition':True,
'type': 'text'},
]
if self.allow_edit:
self.header_buttons = [{'name':'save_button', 'title':_('Save')}]
else:
self.header_buttons = []
## handle_header table submit
if form.get('header_submitted', None):
plone.protect.CheckAuthenticator(form)
message = None
values = {}
for row in [r for r in self.header_rows if r['allow_edit']]:
value = urllib.unquote_plus(form.get(row['id'], ''))
if row['id'] == 'SampleType':
if not value:
message = PMF(
u'error_required',
default=u'${name} is required, please correct.',
mapping={'name': _('Sample Type')})
break
if not bsc(portal_type = 'SampleType', title = value):
message = _("${sampletype} is not a valid sample type",
mapping={'sampletype':value})
break
if row['id'] == 'SamplePoint':
if value and \
not bsc(portal_type = 'SamplePoint', title = value):
message = _("${samplepoint} is not a valid sample point",
mapping={'sampletype':value})
break
values[row['id']] = value
# boolean - checkboxes are 'true' or 'false in form.
for row in [r for r in self.header_rows if r.get('type', '') == 'boolean']:
value = form.get(row['id'], 'false')
values[row['id']] = value == 'true' and True or False
if not message:
self.context.edit(**values)
self.context.reindexObject()
ars = self.context.getAnalysisRequests()
for ar in ars:
ar.reindexObject()
message = PMF("Changes saved.")
# If this sample was "To Be Sampled", and the
# Sampler and DateSampled fields were completed,
# do the Sampled transition.
if workflow.getInfoFor(sample, "review_state") == "to_be_sampled" \
and form.get("Sampler", None) \
and form.get("DateSampled", None):
workflow.doActionFor(sample, "sample")
sample.reindexObject()
self.context.plone_utils.addPortalMessage(message, 'info')
url = self.context.absolute_url().split("?")[0]
self.request.RESPONSE.redirect(url)
return
## Create Sample Partitions table
parts_table = None
if not self.allow_edit:
p = SamplePartitionsView(self.context, self.request)
p.allow_edit = self.allow_edit
p.show_select_column = self.allow_edit
p.show_workflow_action_buttons = self.allow_edit
p.show_column_toggles = False
p.show_select_all_checkbox = False
p.review_states[0]['transitions'] = [{'id': 'empty'},] # none
parts_table = p.contents_table()
self.parts = parts_table
## Create Field and Lab Analyses tables
self.tables = {}
if not self.allow_edit:
for poc in POINTS_OF_CAPTURE:
if not self.context.getAnalyses({'getPointOfCapture': poc}):
continue
t = SampleAnalysesView(self.context,
self.request,
getPointOfCapture = poc,
sort_on = 'getServiceTitle')
t.form_id = "sample_%s_analyses" % poc
if poc == 'field':
t.review_states[0]['columns'].remove('DueDate')
t.show_column_toggles = False
t.review_states[0]['transitions'] = [{'id':'submit'},
{'id':'retract'},
{'id':'verify'}]
self.tables[POINTS_OF_CAPTURE.getValue(poc)] = t.contents_table()
return self.template()
def folderitem(self, obj, item, index):
workflow = getToolByName(self.context, "portal_workflow")
mtool = getToolByName(self.context, 'portal_membership')
member = mtool.getAuthenticatedMember()
translate = self.context.translate
roles = member.getRoles()
hideclientlink = 'RegulatoryInspector' in roles \
and 'Manager' not in roles \
and 'LabManager' not in roles \
and 'LabClerk' not in roles
if not item.has_key('obj'):
return item
obj = item['obj']
item['replace']['getSampleID'] = "<a href='%s'>%s</a>" % \
(item['url'], obj.getSampleID())
item['replace']['Requests'] = ",".join(
["<a href='%s'>%s</a>" % (o.absolute_url(), o.Title())
for o in obj.getAnalysisRequests()])
item['Client'] = obj.aq_parent.Title()
if hideclientlink == False:
item['replace']['Client'] = "<a href='%s'>%s</a>" % \
(obj.aq_parent.absolute_url(), obj.aq_parent.Title())
item['Creator'] = self.user_fullname(obj.Creator())
item['DateReceived'] = self.ulocalized_time(obj.getDateReceived())
deviation = obj.getSamplingDeviation()
item['SamplingDeviation'] = deviation and deviation.Title() or ''
item['getStorageLocation'] = obj.getStorageLocation() and obj.getStorageLocation().Title() or ''
item['AdHoc'] = obj.getAdHoc() and True or ''
item['Created'] = self.ulocalized_time(obj.created())
sd = obj.getSamplingDate()
item['SamplingDate'] = \
self.ulocalized_time(sd, long_format=1) if sd else ''
after_icons = ''
if obj.getSampleType().getHazardous():
after_icons += "<img title='%s' " \
"src='%s/++resource++bika.lims.images/hazardous.png'>" % \
(t(_("Hazardous")),
self.portal_url)
if sd and sd > DateTime():
after_icons += "<img title='%s' " \
"src='%s/++resource++bika.lims.images/calendar.png' >" % \
(t(_("Future dated sample")),
self.portal_url)
if after_icons:
item['after']['getSampleID'] = after_icons
if obj.getSamplingWorkflowEnabled():
datesampled = self.ulocalized_time(
obj.getDateSampled(), long_format=True)
if not datesampled:
datesampled = self.ulocalized_time(
DateTime(), long_format=True)
item['class']['DateSampled'] = 'provisional'
sampler = obj.getSampler().strip()
if sampler:
item['replace']['getSampler'] = self.user_fullname(sampler)
if 'Sampler' in member.getRoles() and not sampler:
sampler = member.id
item['class']['getSampler'] = 'provisional'
else:
datesampled = self.ulocalized_time(obj.getDateSampled(), long_format=True)
sampler = ''
item['DateSampled'] = datesampled
item['getSampler'] = sampler
# sampling workflow - inline edits for Sampler, Date Sampled and
# Scheduled Sampling Sampler
checkPermission = self.context.portal_membership.checkPermission
state = workflow.getInfoFor(obj, 'review_state')
if state in ['to_be_sampled', 'scheduled_sampling']:
item['required'] = []
item['allow_edit'] = []
item['choices'] = {}
samplers = getUsers(obj, ['Sampler', 'LabManager', 'Manager'])
users = [(
{'ResultValue': u, 'ResultText': samplers.getValue(u)})
for u in samplers]
# both situations
if checkPermission(SampleSample, obj) or\
self._schedule_sampling_permissions():
item['required'].append('getSampler')
item['allow_edit'].append('getSampler')
item['choices']['getSampler'] = users
# sampling permissions
if checkPermission(SampleSample, obj):
getAuthenticatedMember = self.context.\
portal_membership.getAuthenticatedMember
username = getAuthenticatedMember().getUserName()
Sampler = sampler and sampler or \
(username in samplers.keys() and username) or ''
item['required'].append('DateSampled')
item['allow_edit'].append('DateSampled')
item['getSampler'] = Sampler
# coordinator permissions
if self._schedule_sampling_permissions():
item['required'].append('SamplingDate')
item['allow_edit'].append('SamplingDate')
item['required'].append('getScheduledSamplingSampler')
item['allow_edit'].append(
'getScheduledSamplingSampler')
item['choices']['getScheduledSamplingSampler'] = users
# These don't exist on samples
# the columns exist just to set "preserve" transition from lists.
# XXX This should be a list of preservers...
item['getPreserver'] = ''
item['getDatePreserved'] = ''
# Here we are defining the name of the content field represented by
# the column
item['field']['getSampler'] = 'Sampler'
item['field']['getScheduledSamplingSampler'] =\
'ScheduledSamplingSampler'
# inline edits for Preserver and Date Preserved
checkPermission = self.context.portal_membership.checkPermission
if checkPermission(PreserveSample, obj):
item['required'] = ['getPreserver', 'getDatePreserved']
item['allow_edit'] = ['getPreserver', 'getDatePreserved']
preservers = getUsers(obj, ['Preserver', 'LabManager', 'Manager'])
getAuthenticatedMember = self.context.portal_membership.getAuthenticatedMember
username = getAuthenticatedMember().getUserName()
users = [({'ResultValue': u, 'ResultText': preservers.getValue(u)})
for u in preservers]
item['choices'] = {'getPreserver': users}
preserver = username in preservers.keys() and username or ''
item['getPreserver'] = preserver
item['getDatePreserved'] = self.ulocalized_time(DateTime())
item['class']['getPreserver'] = 'provisional'
item['class']['getDatePreserved'] = 'provisional'
return item
def __init__(self, context, request):
super(FolderView, self).__init__(context, request)
self.catalog = CATALOG_WORKSHEET_LISTING
self.contentFilter = {
'review_state':['open', 'to_be_verified', 'verified', 'rejected'],
'sort_on':'CreationDate',
'sort_order': 'reverse'}
self.context_actions = {_('Add'):
{'url': 'worksheet_add',
'icon': '++resource++bika.lims.images/add.png',
'class': 'worksheet_add'}}
self.show_table_only = False
self.show_sort_column = False
self.show_select_row = False
self.show_select_all_checkbox = True
self.show_select_column = True
self.restrict_results = False
self.wf = getToolByName(self, 'portal_workflow')
self.rc = getToolByName(self, REFERENCE_CATALOG)
self.pm = getToolByName(self.context, "portal_membership")
request.set('disable_border', 1)
self.icon = self.portal_url + "/++resource++bika.lims.images/worksheet_big.png"
self.title = self.context.translate(_("Worksheets"))
self.description = ""
# this is a property of self, because self.getAnalysts returns it
self.analysts = getUsers(self, ['Manager', 'LabManager', 'Analyst'])
self.analysts = self.analysts.sortedByKey()
self.allowed_department_filtering = \
self.context.bika_setup.getAllowDepartmentFiltering()
self.columns = {
'Title': {'title': _('Worksheet'),
'index': 'getId'},
'Analyst': {'title': _('Analyst'),
'index': 'getAnalyst', },
'Template': {'title': _('Template'),
'attr': 'getWorksheetTemplateTitle',
'replace_url': 'getWorksheetTemplateURL', },
'NumRegularSamples': {
'title': _('Samples'),
'sortable': False, },
'NumQCAnalyses': {
'title': _('QC Analyses'),
'sortable': False, },
'NumRegularAnalyses': {
'title': _('Routine Analyses'),
'sortable': False, },
'CreationDate': {'title': PMF('Date Created'),
'index': 'created'},
'state_title': {'title': _('State'),
'index': 'review_state',
'attr': 'state_title'},
}
self.review_states = [
{'id':'default',
'title': _('All'),
'contentFilter': {'review_state': ['open',
'to_be_verified', 'verified'],
'sort_on':'CreationDate',
'sort_order': 'reverse'},
'transitions':[{'id':'retract'},
{'id':'verify'},
{'id':'reject'}],
'columns':['Title',
'Analyst',
'Template',
'NumRegularSamples',
'NumQCAnalyses',
'NumRegularAnalyses',
'CreationDate',
'state_title']},
# getAuthenticatedMember does not work in __init__
# so 'mine' is configured further in 'folderitems' below.
{'id':'mine',
'title': _('Mine'),
'contentFilter': {'review_state':['open', 'to_be_verified',
'verified', 'rejected'],
'sort_on':'CreationDate',
'sort_order': 'reverse'},
'transitions':[{'id':'retract'},
{'id':'verify'},
{'id':'reject'}],
'columns':['Title',
'Analyst',
'Template',
'NumRegularSamples',
'NumQCAnalyses',
'NumRegularAnalyses',
'CreationDate',
'state_title']},
{'id':'open',
'title': _('Open'),
'contentFilter': {'review_state':'open',
'sort_on':'CreationDate',
'sort_order': 'reverse'},
'transitions':[],
'columns':['Title',
'Analyst',
'Template',
'NumRegularSamples',
'NumQCAnalyses',
'NumRegularAnalyses',
'CreationDate',
'state_title']},
{'id':'to_be_verified',
'title': _('To be verified'),
'contentFilter': {'review_state':'to_be_verified',
'sort_on':'CreationDate',
'sort_order': 'reverse'},
'transitions':[{'id':'retract'},
{'id':'verify'},
{'id':'reject'}],
'columns':['Title',
'Analyst',
'Template',
'NumRegularSamples',
'NumQCAnalyses',
'NumRegularAnalyses',
'CreationDate',
'state_title']},
{'id':'verified',
'title': _('Verified'),
'contentFilter': {'review_state':'verified',
'sort_on':'CreationDate',
'sort_order': 'reverse'},
'transitions':[],
'columns':['Title',
'Analyst',
'Template',
'NumRegularSamples',
'NumQCAnalyses',
'NumRegularAnalyses',
'CreationDate',
'state_title']},
]
def __init__(self, context, request):
BrowserView.__init__(self, context, request)
self.getAnalysts = getUsers(context,
['Manager', 'LabManager', 'Analyst'])
self.layout_displaylist = WORKSHEET_LAYOUT_OPTIONS
def __init__(self, context, request):
BikaListingView.__init__(self, context, request)
self.contentFilter = {
'portal_type': 'Worksheet',
'review_state': ['open', 'to_be_verified', 'verified', 'rejected'],
'sort_on': 'id',
'sort_order': 'reverse'
}
self.context_actions = {
_('Add'): {
'url': 'worksheet_add',
'icon': '++resource++bika.lims.images/add.png',
'class': 'worksheet_add'
}
}
self.show_table_only = False
self.show_sort_column = False
self.show_select_row = False
self.show_select_all_checkbox = True
self.show_select_column = True
request.set('disable_border', 1)
self.icon = "++resource++bika.lims.images/worksheet_big.png"
self.title = _("Worksheets")
self.description = ""
self.TimeOrDate = TimeOrDate
pm = getToolByName(context, "portal_membership")
# this is a property of self, because self.getAnalysts returns it
self.analysts = getUsers(self, ['Manager', 'LabManager', 'Analyst'])
bsc = getToolByName(context, 'bika_setup_catalog')
templates = [
t for t in bsc(portal_type='WorksheetTemplate',
inactive_state='active')
]
self.templates = [(t.UID, t.Title) for t in templates]
self.templates.sort(lambda x, y: cmp(x[1], y[1]))
self.instruments = [
(i.UID, i.Title)
for i in bsc(portal_type='Instrument', inactive_state='active')
]
self.instruments.sort(lambda x, y: cmp(x[1], y[1]))
self.templateinstruments = {}
for t in templates:
i = t.getObject().getInstrument()
if i:
self.templateinstruments[t.UID] = i.UID()
else:
self.templateinstruments[t.UID] = ''
self.columns = {
'Title': {
'title': _('Worksheet'),
'index': 'sortable_title'
},
'Analyst': {
'title': _('Analyst'),
'index': 'getAnalyst',
'toggle': True
},
'Template': {
'title': _('Template'),
'toggle': True
},
'Services': {
'title': _('Services'),
'sortable': False,
'toggle': False
},
'SampleTypes': {
'title': _('Sample Types'),
'sortable': False,
'toggle': False
},
'QC': {
'title': _('QC'),
'sortable': False,
'toggle': False
},
'CreationDate': {
'title': _('Creation Date'),
'toggle': True
},
#'index': 'created'},
'state_title': {
'title': _('State'),
'index': 'review_state'
},
}
self.review_states = [
{
'id':
'all',
'title':
_('All'),
'contentFilter': {
'portal_type':
'Worksheet',
'review_state':
['open', 'to_be_verified', 'verified', 'rejected'],
'sort_on':
'id',
'sort_order':
'reverse'
},
'transitions': [{
'id': 'retract'
}, {
'id': 'verify'
}, {
'id': 'reject'
}],
'columns': [
'Title', 'Analyst', 'Template', 'Services', 'SampleTypes',
'QC', 'CreationDate', 'state_title'
]
},
# getAuthenticatedMember does not work in __init__
# so 'mine' is configured further in 'folderitems' below.
{
'id':
'mine',
'title':
_('Mine'),
'contentFilter': {
'portal_type':
'Worksheet',
'review_state':
['open', 'to_be_verified', 'verified', 'rejected'],
'sort_on':
'id',
'sort_order':
'reverse'
},
'transitions': [{
'id': 'retract'
}, {
'id': 'verify'
}, {
'id': 'reject'
}],
'columns': [
'Title', 'Analyst', 'Template', 'Services', 'SampleTypes',
'QC', 'CreationDate', 'state_title'
]
},
{
'id':
'open',
'title':
_('Open'),
'contentFilter': {
'portal_type': 'Worksheet',
'review_state': 'open',
'sort_on': 'id',
'sort_order': 'reverse'
},
'transitions': [],
'columns': [
'Title', 'Analyst', 'Template', 'Services', 'SampleTypes',
'QC', 'CreationDate', 'state_title'
]
},
{
'id':
'to_be_verified',
'title':
_('To be verified'),
'contentFilter': {
'portal_type': 'Worksheet',
'review_state': 'to_be_verified',
'sort_on': 'id',
'sort_order': 'reverse'
},
'transitions': [{
'id': 'retract'
}, {
'id': 'verify'
}, {
'id': 'reject'
}],
'columns': [
'Title', 'Analyst', 'Template', 'Services', 'SampleTypes',
'QC', 'CreationDate', 'state_title'
]
},
{
'id':
'verified',
'title':
_('Verified'),
'contentFilter': {
'portal_type': 'Worksheet',
'review_state': 'verified',
'sort_on': 'id',
'sort_order': 'reverse'
},
'transitions': [],
'columns': [
'Title', 'Analyst', 'Template', 'Services', 'SampleTypes',
'QC', 'CreationDate', 'state_title'
]
},
]
def getSamplers(self):
return getUsers(self, [
'Sampler',
])
def getSamplers(self):
return getUsers(self, ['Sampler', ])
def folderitems(self, full_objects = False):
mtool = getToolByName(self.context, 'portal_membership')
workflow = getToolByName(self.context, 'portal_workflow')
checkPermission = mtool.checkPermission
edit_states = ['sample_registered', 'to_be_sampled', 'sampled',
'to_be_preserved', 'sample_due', 'attachment_due',
'sample_received', 'to_be_verified']
if self.context.portal_type == 'AnalysisRequest':
self.sample = self.context.getSample()
else:
self.sample = self.context
self.allow_edit = checkPermission(EditSamplePartition, self.sample) \
and workflow.getInfoFor(self.sample, 'review_state') in edit_states \
and workflow.getInfoFor(self.sample, 'cancellation_state') == 'active'
self.show_select_column = self.allow_edit
if self.allow_edit == False:
self.review_states[0]['custom_actions'] = []
bsc = getToolByName(self.context, 'bika_setup_catalog')
containers = [({'ResultValue':o.UID,
'ResultText':o.title})
for o in bsc(portal_type="Container",
inactive_state="active")]
preservations = [({'ResultValue':o.UID,
'ResultText':o.title})
for o in bsc(portal_type="Preservation",
inactive_state="active")]
parts = [p for p in self.sample.objectValues()
if p.portal_type == 'SamplePartition']
items = []
for part in parts:
# this folderitems doesn't subclass from the bika_listing.py
# so we create items from scratch
item = {
'obj': part,
'id': part.id,
'uid': part.UID(),
'title': part.Title(),
'type_class': 'contenttype-SamplePartition',
'url': part.aq_parent.absolute_url(),
'relative_url': part.aq_parent.absolute_url(),
'view_url': part.aq_parent.absolute_url(),
'created': self.ulocalized_time(part.created()),
'replace': {},
'before': {},
'after': {},
'choices': {},
'class': {},
'allow_edit': [],
'required': [],
}
state = workflow.getInfoFor(part, 'review_state')
item['state_class'] = 'state-'+state
item['state_title'] = _(state)
item['PartTitle'] = part.getId()
container = part.getContainer()
if self.allow_edit:
item['getContainer'] = container and container.UID() or ''
else:
item['getContainer'] = container and container.Title() or ''
preservation = part.getPreservation()
if self.allow_edit:
item['getPreservation'] = preservation and preservation.UID() or ''
else:
item['getPreservation'] = preservation and preservation.Title() or ''
## sampler = part.getSampler().strip()
## item['getSampler'] = \
## sampler and self.user_fullname(sampler) or ''
## datesampled = part.getDateSampled()
## item['getDateSampled'] = \
## datesampled and self.ulocalized_time(datesampled) or ''
preserver = part.getPreserver().strip()
item['getPreserver'] = \
preserver and self.user_fullname(preserver) or ''
datepreserved = part.getDatePreserved()
item['getDatePreserved'] = \
datepreserved and self.ulocalized_time(datepreserved, long_format=False) or ''
disposaldate = part.getDisposalDate()
item['getDisposalDate'] = \
disposaldate and self.ulocalized_time(disposaldate, long_format=False) or ''
# inline edits for Container and Preservation
if self.allow_edit:
item['allow_edit'] = ['getContainer', 'getPreservation']
item['choices']['getPreservation'] = preservations
item['choices']['getContainer'] = containers
# inline edits for Sampler and Date Sampled
## checkPermission = self.context.portal_membership.checkPermission
## if checkPermission(SampleSample, part) \
## and not samplingdate > DateTime():
## item['required'] += ['getSampler', 'getDateSampled']
## item['allow_edit'] += ['getSampler', 'getDateSampled']
## samplers = getUsers(part, ['Sampler', 'LabManager', 'Manager'])
## getAuthenticatedMember = part.portal_membership.getAuthenticatedMember
## username = getAuthenticatedMember().getUserName()
## users = [({'ResultValue': u, 'ResultText': samplers.getValue(u)})
## for u in samplers]
## item['choices']['getSampler'] = users
## item['getSampler'] = sampler and sampler or \
## (username in samplers.keys() and username) or ''
## item['getDateSampled'] = item['getDateSampled'] \
## or DateTime().strftime(self.date_format_short)
## item['class']['getSampler'] = 'provisional'
## item['class']['getDateSampled'] = 'provisional'
# inline edits for Preserver and Date Preserved
checkPermission = self.context.portal_membership.checkPermission
if checkPermission(PreserveSample, part):
item['required'] += ['getPreserver', 'getDatePreserved']
if self.allow_edit:
item['allow_edit'] += ['getPreserver', 'getDatePreserved']
preservers = getUsers(part, ['Preserver', 'LabManager', 'Manager'])
getAuthenticatedMember = part.portal_membership.getAuthenticatedMember
username = getAuthenticatedMember().getUserName()
users = [({'ResultValue': u, 'ResultText': preservers.getValue(u)})
for u in preservers]
item['choices']['getPreserver'] = users
item['getPreserver'] = preserver and preserver or \
(username in preservers.keys() and username) or ''
item['getDatePreserved'] = item['getDatePreserved'] \
or DateTime().strftime(self.date_format_short)
item['class']['getPreserver'] = 'provisional'
item['class']['getDatePreserved'] = 'provisional'
items.append(item)
items = sorted(items, key=itemgetter('id'))
return items
def select_analyst(self, allow_blank=False, style=None):
self.style = style
self.analysts = getUsers(self.context,
['Manager', 'Analyst', 'LabManager'],
allow_blank)
return self.select_analyst_pt()
def folderitems(self, full_objects=False):
mtool = getToolByName(self.context, 'portal_membership')
workflow = getToolByName(self.context, 'portal_workflow')
checkPermission = mtool.checkPermission
edit_states = [
'sample_registered', 'to_be_sampled', 'sampled', 'to_be_preserved',
'sample_due', 'attachment_due', 'sample_received', 'to_be_verified'
]
if self.context.portal_type == 'AnalysisRequest':
self.sample = self.context.getSample()
else:
self.sample = self.context
self.allow_edit = checkPermission(EditSamplePartition, self.sample) \
and workflow.getInfoFor(self.sample, 'review_state') in edit_states \
and workflow.getInfoFor(self.sample, 'cancellation_state') == 'active'
self.show_select_column = self.allow_edit
if self.allow_edit == False:
self.review_states[0]['custom_actions'] = []
bsc = getToolByName(self.context, 'bika_setup_catalog')
containers = [({
'ResultValue': o.UID,
'ResultText': o.title
}) for o in bsc(portal_type="Container", inactive_state="active")]
preservations = [({
'ResultValue': o.UID,
'ResultText': o.title
}) for o in bsc(portal_type="Preservation", inactive_state="active")]
parts = [
p for p in self.sample.objectValues()
if p.portal_type == 'SamplePartition'
]
items = []
for part in parts:
# this folderitems doesn't subclass from the bika_listing.py
# so we create items from scratch
item = {
'obj': part,
'id': part.id,
'uid': part.UID(),
'title': part.Title(),
'type_class': 'contenttype-SamplePartition',
'url': part.aq_parent.absolute_url(),
'relative_url': part.aq_parent.absolute_url(),
'view_url': part.aq_parent.absolute_url(),
'created': self.ulocalized_time(part.created()),
'replace': {},
'before': {},
'after': {},
'choices': {},
'class': {},
'allow_edit': [],
'required': [],
}
state = workflow.getInfoFor(part, 'review_state')
item['state_class'] = 'state-' + state
item['state_title'] = _(state)
item['PartTitle'] = part.getId()
container = part.getContainer()
if self.allow_edit:
item['getContainer'] = container and container.UID() or ''
else:
item['getContainer'] = container and container.Title() or ''
item['SecuritySealIntact'] = container.getSecuritySealIntact(
) if container else True
preservation = part.getPreservation()
if self.allow_edit:
item['getPreservation'] = preservation and preservation.UID(
) or ''
else:
item['getPreservation'] = preservation and preservation.Title(
) or ''
## sampler = part.getSampler().strip()
## item['getSampler'] = \
## sampler and self.user_fullname(sampler) or ''
## datesampled = part.getDateSampled()
## item['getDateSampled'] = \
## datesampled and self.ulocalized_time(datesampled) or ''
preserver = part.getPreserver().strip()
item['getPreserver'] = \
preserver and self.user_fullname(preserver) or ''
datepreserved = part.getDatePreserved()
item['getDatePreserved'] = \
datepreserved and self.ulocalized_time(datepreserved, long_format=False) or ''
disposaldate = part.getDisposalDate()
item['getDisposalDate'] = \
disposaldate and self.ulocalized_time(disposaldate, long_format=False) or ''
# inline edits for Container and Preservation
if self.allow_edit:
item['allow_edit'] = [
'getContainer', 'getPreservation', 'SecuritySealIntact'
]
item['choices']['getPreservation'] = preservations
item['choices']['getContainer'] = containers
# inline edits for Sampler and Date Sampled
## checkPermission = self.context.portal_membership.checkPermission
## if checkPermission(SampleSample, part) \
## and not samplingdate > DateTime():
## item['required'] += ['getSampler', 'getDateSampled']
## item['allow_edit'] += ['getSampler', 'getDateSampled']
## samplers = getUsers(part, ['Sampler', 'LabManager', 'Manager'])
## getAuthenticatedMember = part.portal_membership.getAuthenticatedMember
## username = getAuthenticatedMember().getUserName()
## users = [({'ResultValue': u, 'ResultText': samplers.getValue(u)})
## for u in samplers]
## item['choices']['getSampler'] = users
## item['getSampler'] = sampler and sampler or \
## (username in samplers.keys() and username) or ''
## item['getDateSampled'] = item['getDateSampled'] \
## or DateTime().strftime(self.date_format_short)
## item['class']['getSampler'] = 'provisional'
## item['class']['getDateSampled'] = 'provisional'
# inline edits for Preserver and Date Preserved
checkPermission = self.context.portal_membership.checkPermission
if checkPermission(PreserveSample, part):
item['required'] += ['getPreserver', 'getDatePreserved']
if self.allow_edit:
item['allow_edit'] += ['getPreserver', 'getDatePreserved']
preservers = getUsers(part,
['Preserver', 'LabManager', 'Manager'])
getAuthenticatedMember = part.portal_membership.getAuthenticatedMember
username = getAuthenticatedMember().getUserName()
users = [({
'ResultValue': u,
'ResultText': preservers.getValue(u)
}) for u in preservers]
item['choices']['getPreserver'] = users
item['getPreserver'] = preserver and preserver or \
(username in preservers.keys() and username) or ''
item['getDatePreserved'] = item['getDatePreserved'] \
or DateTime().strftime(self.date_format_short)
item['class']['getPreserver'] = 'provisional'
item['class']['getDatePreserved'] = 'provisional'
items.append(item)
items = sorted(items, key=itemgetter('id'))
return items
def select_analyst(self):
self.analysts = getUsers(self.context,
['Manager', 'LabManager', 'Analyst'])
return self.select_analyst_pt()
def getSamplers(self):
return getUsers(self, ['LabManager', 'Sampler'])
def _getSamplersDisplayList(self):
""" Returns the available users in the system with the roles
'LabManager' and/or 'Sampler'
"""
return getUsers(self, ['LabManager', 'Sampler'])
def folderitems(self, full_objects=False):
workflow = getToolByName(self.context, "portal_workflow")
items = BikaListingView.folderitems(self)
mtool = getToolByName(self.context, "portal_membership")
member = mtool.getAuthenticatedMember()
roles = member.getRoles()
hideclientlink = (
"RegulatoryInspector" in roles
and "Manager" not in roles
and "LabManager" not in roles
and "LabClerk" not in roles
)
for x in range(len(items)):
if "obj" not in items[x]:
continue
obj = items[x]["obj"]
sample = obj.getSample()
if getSecurityManager().checkPermission(EditResults, obj):
url = obj.absolute_url() + "/manage_results"
else:
url = obj.absolute_url()
items[x]["Client"] = obj.aq_parent.Title()
if hideclientlink is False:
items[x]["replace"]["Client"] = "<a href='%s'>%s</a>" % (
obj.aq_parent.absolute_url(),
obj.aq_parent.Title(),
)
items[x]["Creator"] = self.user_fullname(obj.Creator())
items[x]["getRequestID"] = obj.getRequestID()
items[x]["replace"]["getRequestID"] = "<a href='%s'>%s</a>" % (url, items[x]["getRequestID"])
items[x]["getSample"] = sample
items[x]["replace"]["getSample"] = "<a href='%s'>%s</a>" % (sample.absolute_url(), sample.Title())
items[x]["replace"]["getProfilesTitle"] = ", ".join([p.Title() for p in obj.getProfiles()])
if obj.getAnalysesNum():
items[x]["getAnalysesNum"] = str(obj.getAnalysesNum()[0]) + "/" + str(obj.getAnalysesNum()[1])
else:
items[x]["getAnalysesNum"] = ""
batch = obj.getBatch()
if batch:
items[x]["BatchID"] = batch.getBatchID()
items[x]["replace"]["BatchID"] = "<a href='%s'>%s</a>" % (batch.absolute_url(), items[x]["BatchID"])
else:
items[x]["BatchID"] = ""
val = obj.Schema().getField("SubGroup").get(obj)
items[x]["SubGroup"] = val.Title() if val else ""
samplingdate = obj.getSample().getSamplingDate()
items[x]["SamplingDate"] = self.ulocalized_time(samplingdate, long_format=1)
items[x]["getDateReceived"] = self.ulocalized_time(obj.getDateReceived())
items[x]["getDatePublished"] = self.ulocalized_time(obj.getDatePublished())
deviation = sample.getSamplingDeviation()
items[x]["SamplingDeviation"] = deviation and deviation.Title() or ""
priority = obj.getPriority()
items[x]["Priority"] = "" # priority.Title()
items[x]["getStorageLocation"] = sample.getStorageLocation() and sample.getStorageLocation().Title() or ""
items[x]["AdHoc"] = sample.getAdHoc() and True or ""
after_icons = ""
state = workflow.getInfoFor(obj, "worksheetanalysis_review_state")
if state == "assigned":
after_icons += "<img src='%s/++resource++bika.lims.images/worksheet.png' title='%s'/>" % (
self.portal_url,
t(_("All analyses assigned")),
)
if workflow.getInfoFor(obj, "review_state") == "invalid":
after_icons += "<img src='%s/++resource++bika.lims.images/delete.png' title='%s'/>" % (
self.portal_url,
t(_("Results have been withdrawn")),
)
if obj.getLate():
after_icons += "<img src='%s/++resource++bika.lims.images/late.png' title='%s'>" % (
self.portal_url,
t(_("Late Analyses")),
)
if samplingdate > DateTime():
after_icons += "<img src='%s/++resource++bika.lims.images/calendar.png' title='%s'>" % (
self.portal_url,
t(_("Future dated sample")),
)
if obj.getInvoiceExclude():
after_icons += "<img src='%s/++resource++bika.lims.images/invoice_exclude.png' title='%s'>" % (
self.portal_url,
t(_("Exclude from invoice")),
)
if sample.getSampleType().getHazardous():
after_icons += "<img src='%s/++resource++bika.lims.images/hazardous.png' title='%s'>" % (
self.portal_url,
t(_("Hazardous")),
)
if after_icons:
items[x]["after"]["getRequestID"] = after_icons
items[x]["Created"] = self.ulocalized_time(obj.created())
contact = obj.getContact()
if contact:
items[x]["ClientContact"] = contact.Title()
items[x]["replace"]["ClientContact"] = "<a href='%s'>%s</a>" % (contact.absolute_url(), contact.Title())
else:
items[x]["ClientContact"] = ""
SamplingWorkflowEnabled = sample.getSamplingWorkflowEnabled()
if SamplingWorkflowEnabled and not samplingdate > DateTime():
datesampled = self.ulocalized_time(sample.getDateSampled())
if not datesampled:
datesampled = self.ulocalized_time(DateTime(), long_format=1)
items[x]["class"]["getDateSampled"] = "provisional"
sampler = sample.getSampler().strip()
if sampler:
items[x]["replace"]["getSampler"] = self.user_fullname(sampler)
if "Sampler" in member.getRoles() and not sampler:
sampler = member.id
items[x]["class"]["getSampler"] = "provisional"
else:
datesampled = ""
sampler = ""
items[x]["getDateSampled"] = datesampled
items[x]["getSampler"] = sampler
# sampling workflow - inline edits for Sampler and Date Sampled
checkPermission = self.context.portal_membership.checkPermission
state = workflow.getInfoFor(obj, "review_state")
if state == "to_be_sampled" and checkPermission(SampleSample, obj) and not samplingdate > DateTime():
items[x]["required"] = ["getSampler", "getDateSampled"]
items[x]["allow_edit"] = ["getSampler", "getDateSampled"]
samplers = getUsers(sample, ["Sampler", "LabManager", "Manager"])
username = member.getUserName()
users = [({"ResultValue": u, "ResultText": samplers.getValue(u)}) for u in samplers]
items[x]["choices"] = {"getSampler": users}
Sampler = sampler and sampler or (username in samplers.keys() and username) or ""
items[x]["getSampler"] = Sampler
# These don't exist on ARs
# XXX This should be a list of preservers...
items[x]["getPreserver"] = ""
items[x]["getDatePreserved"] = ""
# inline edits for Preserver and Date Preserved
checkPermission = self.context.portal_membership.checkPermission
if checkPermission(PreserveSample, obj):
items[x]["required"] = ["getPreserver", "getDatePreserved"]
items[x]["allow_edit"] = ["getPreserver", "getDatePreserved"]
preservers = getUsers(obj, ["Preserver", "LabManager", "Manager"])
username = member.getUserName()
users = [({"ResultValue": u, "ResultText": preservers.getValue(u)}) for u in preservers]
items[x]["choices"] = {"getPreserver": users}
preserver = username in preservers.keys() and username or ""
items[x]["getPreserver"] = preserver
items[x]["getDatePreserved"] = self.ulocalized_time(DateTime(), long_format=1)
items[x]["class"]["getPreserver"] = "provisional"
items[x]["class"]["getDatePreserved"] = "provisional"
# Submitting user may not verify results
if items[x]["review_state"] == "to_be_verified" and not checkPermission(VerifyOwnResults, obj):
self_submitted = False
try:
review_history = list(workflow.getInfoFor(obj, "review_history"))
review_history.reverse()
for event in review_history:
if event.get("action") == "submit":
if event.get("actor") == member.getId():
self_submitted = True
break
if self_submitted:
items[x]["after"]["state_title"] = (
"<img src='++resource++bika.lims.images/submitted-by-current-user.png' title='%s'/>"
% t(_("Cannot verify: Submitted by current user"))
)
except Exception:
pass
# Hide Preservation/Sampling workflow actions if the edit columns
# are not displayed.
toggle_cols = self.get_toggle_cols()
new_states = []
for i, state in enumerate(self.review_states):
if state["id"] == self.review_state:
if "getSampler" not in toggle_cols or "getDateSampled" not in toggle_cols:
if "hide_transitions" in state:
state["hide_transitions"].append("sample")
else:
state["hide_transitions"] = ["sample"]
if "getPreserver" not in toggle_cols or "getDatePreserved" not in toggle_cols:
if "hide_transitions" in state:
state["hide_transitions"].append("preserve")
else:
state["hide_transitions"] = ["preserve"]
new_states.append(state)
self.review_states = new_states
return items
def __init__(self, context, request):
BrowserView.__init__(self, context, request)
self.getAnalysts = getUsers(context, ['Manager', 'LabManager', 'Analyst'])
def select_user(self, allow_blank=True, style=None):
self.style = style
self.allow_blank = allow_blank
self.users = getUsers(self.context, None, allow_blank)
return self.select_user_pt()
def __call__(self):
form = self.request.form
bc = getToolByName(self.context, 'bika_catalog')
bsc = getToolByName(self.context, 'bika_setup_catalog')
checkPermission = self.context.portal_membership.checkPermission
getAuthenticatedMember = self.context.portal_membership.getAuthenticatedMember
workflow = getToolByName(self.context, 'portal_workflow')
ars = self.context.getAnalysisRequests()
sample = self.context
## Create header_table data rows
ar_links = ", ".join([
"<a href='%s'>%s</a>" % (ar.absolute_url(), ar.Title())
for ar in ars
])
sp = self.context.getSamplePoint()
st = self.context.getSampleType()
if workflow.getInfoFor(self.context,
'cancellation_state') == "cancelled":
allow_sample_edit = False
else:
edit_states = ['to_be_sampled', 'to_be_preserved', 'sample_due']
allow_sample_edit = checkPermission(ManageSamples, self.context) \
and workflow.getInfoFor(self.context, 'review_state') in edit_states
SamplingWorkflowEnabled =\
self.context.bika_setup.getSamplingWorkflowEnabled()
samplers = getUsers(sample, ['Sampler', 'LabManager', 'Manager'])
samplingdeviations = DisplayList(
[(sd.UID, sd.title) for sd \
in bsc(portal_type = 'SamplingDeviation',
inactive_state = 'active')])
self.header_columns = 3
self.header_rows = [
{
'id': 'ClientReference',
'title': _('Client Reference'),
'allow_edit': self.allow_edit,
'value': self.context.getClientReference(),
'condition': True,
'type': 'text'
},
{
'id': 'ClientSampleID',
'title': _('Client SID'),
'allow_edit': self.allow_edit,
'value': self.context.getClientSampleID(),
'condition': True,
'type': 'text'
},
{
'id': 'Requests',
'title': _('Requests'),
'allow_edit': False,
'value': ar_links,
'condition': True,
'type': 'text'
},
{
'id': 'SampleType',
'title': _('Sample Type'),
'allow_edit': self.allow_edit and allow_sample_edit,
'value': st and st.Title() or '',
'condition': True,
'type': 'text',
'required': True
},
{
'id': 'SampleMatrix',
'title': _('Sample Matrix'),
'allow_edit': False,
'value': st.getSampleMatrix() and st.getSampleMatrix().Title()
or '',
'condition': True,
'type': 'text'
},
{
'id': 'SamplePoint',
'title': _('Sample Point'),
'allow_edit': self.allow_edit and allow_sample_edit,
'value': sp and sp.Title() or '',
'condition': True,
'type': 'text'
},
{
'id': 'Creator',
'title': PMF('Creator'),
'allow_edit': False,
'value': self.user_fullname(self.context.Creator()),
'condition': True,
'type': 'text'
},
{
'id': 'Composite',
'title': _('Composite'),
'allow_edit': self.allow_edit and allow_sample_edit,
'value': self.context.getComposite(),
'condition': True,
'type': 'boolean'
},
{
'id': 'AdHoc',
'title': _('Ad-Hoc'),
'allow_edit': self.allow_edit and allow_sample_edit,
'value': self.context.getAdHoc(),
'condition': True,
'type': 'boolean'
},
{
'id': 'DateCreated',
'title': PMF('Date Created'),
'allow_edit': False,
'value': self.context.created(),
'formatted_value':
self.ulocalized_time(self.context.created()),
'condition': True,
'type': 'text'
},
{
'id':
'SamplingDate',
'title':
_('Sampling Date'),
'allow_edit':
self.allow_edit and allow_sample_edit,
'value':
self.ulocalized_time(self.context.getSamplingDate()),
'formatted_value':
self.ulocalized_time(self.context.getSamplingDate()),
'condition':
True,
'class':
'datepicker',
'type':
'text'
},
{
'id':
'DateSampled',
'title':
_('Date Sampled'),
'allow_edit':
self.allow_edit and allow_sample_edit,
'value':
sample.getDateSampled()
and self.ulocalized_time(sample.getDateSampled()) or '',
'formatted_value':
sample.getDateSampled()
and self.ulocalized_time(sample.getDateSampled()) or '',
'condition':
SamplingWorkflowEnabled,
'class':
'datepicker',
'type':
'text',
'required':
True
},
{
'id': 'Sampler',
'title': _('Sampler'),
'allow_edit': self.allow_edit and allow_sample_edit,
'value': sample.getSampler(),
'formatted_value': sample.getSampler(),
'condition': SamplingWorkflowEnabled,
'vocabulary': samplers,
'type': 'choices',
'required': True
},
{
'id':
'SamplingDeviation',
'title':
_('Sampling Deviation'),
'allow_edit':
self.allow_edit and allow_sample_edit,
'value':
sample.getSamplingDeviation()
and sample.getSamplingDeviation().UID() or '',
'formatted_value':
sample.getSamplingDeviation()
and sample.getSamplingDeviation().Title() or '',
'condition':
True,
'vocabulary':
samplingdeviations,
'type':
'choices'
},
{
'id':
'DateReceived',
'title':
_('Date Received'),
'allow_edit':
False,
'value':
self.context.getDateReceived(),
'formatted_value':
self.ulocalized_time(self.context.getDateReceived()),
'condition':
True,
'type':
'text'
},
{
'id':
'DateExpired',
'title':
_('Date Expired'),
'allow_edit':
False,
'value':
self.context.getDateExpired(),
'formatted_value':
self.ulocalized_time(self.context.getDateExpired()),
'condition':
True,
'type':
'text'
},
{
'id':
'DisposalDate',
'title':
_('Disposal Date'),
'allow_edit':
False,
'value':
self.context.getDisposalDate(),
'formatted_value':
self.ulocalized_time(self.context.getDisposalDate()),
'condition':
True,
'type':
'text'
},
{
'id':
'DateDisposed',
'title':
_('Date Disposed'),
'allow_edit':
False,
'value':
self.context.getDateDisposed(),
'formatted_value':
self.ulocalized_time(self.context.getDateDisposed()),
'condition':
True,
'type':
'text'
},
]
if self.allow_edit:
self.header_buttons = [{'name': 'save_button', 'title': _('Save')}]
else:
self.header_buttons = []
## handle_header table submit
if form.get('header_submitted', None):
plone.protect.CheckAuthenticator(form)
message = None
values = {}
for row in [r for r in self.header_rows if r['allow_edit']]:
value = urllib.unquote_plus(form.get(row['id'], ''))
if row['id'] == 'SampleType':
if not value:
message = PMF(
u'error_required',
default=u'${name} is required, please correct.',
mapping={'name': _('Sample Type')})
break
if not bsc(portal_type='SampleType', title=value):
message = _("${sampletype} is not a valid sample type",
mapping={'sampletype': value})
break
if row['id'] == 'SamplePoint':
if value and \
not bsc(portal_type = 'SamplePoint', title = value):
message = _(
"${samplepoint} is not a valid sample point",
mapping={'sampletype': value})
break
values[row['id']] = value
# boolean - checkboxes are 'true'/'on' or 'false'/missing in form.
for row in [
r for r in self.header_rows
if r.get('type', '') == 'boolean'
]:
value = form.get(row['id'], 'false')
values[row[
'id']] = value == 'true' and True or value == 'on' and True or False
if not message:
self.context.edit(**values)
self.context.reindexObject()
ars = self.context.getAnalysisRequests()
# Analyses and AnalysisRequets have calculated fields
# that are indexed; re-index all these objects.
for ar in ars:
ar.reindexObject()
analyses = self.context.getAnalyses(
{'review_state': 'to_be_sampled'})
for a in analyses:
a.getObject().reindexObject()
message = PMF("Changes saved.")
# If this sample was "To Be Sampled", and the
# Sampler and DateSampled fields were completed,
# do the Sampled transition.
if workflow.getInfoFor(sample, "review_state") == "to_be_sampled" \
and form.get("Sampler", None) \
and form.get("DateSampled", None):
# This transition does not invoke the regular WorkflowAction
# in analysisrequest.py
workflow.doActionFor(sample, "sample")
sample.reindexObject()
self.context.plone_utils.addPortalMessage(message, 'info')
url = self.context.absolute_url().split("?")[0]
self.request.RESPONSE.redirect(url)
return
## Create Sample Partitions table
parts_table = None
if not self.allow_edit:
p = SamplePartitionsView(self.context, self.request)
p.allow_edit = self.allow_edit
p.show_select_column = self.allow_edit
p.show_workflow_action_buttons = self.allow_edit
p.show_column_toggles = False
p.show_select_all_checkbox = False
p.review_states[0]['transitions'] = [
{
'id': 'empty'
},
] # none
parts_table = p.contents_table()
self.parts = parts_table
## Create Field and Lab Analyses tables
self.tables = {}
if not self.allow_edit:
for poc in POINTS_OF_CAPTURE:
if not self.context.getAnalyses({'getPointOfCapture': poc}):
continue
t = SampleAnalysesView(self.context,
self.request,
getPointOfCapture=poc,
sort_on='getServiceTitle')
t.form_id = "sample_%s_analyses" % poc
if poc == 'field':
t.review_states[0]['columns'].remove('DueDate')
t.show_column_toggles = False
t.review_states[0]['transitions'] = [{
'id': 'submit'
}, {
'id': 'retract'
}, {
'id': 'verify'
}]
self.tables[POINTS_OF_CAPTURE.getValue(
poc)] = t.contents_table()
return self.template()
def __call__(self):
self.selection_macros = SelectionMacrosView(self.context, self.request)
self.icon = self.portal_url + "/++resource++bika.lims.images/report_big.png"
self.getAnalysts = getUsers(self.context,
['Manager', 'LabManager', 'Analyst'])
return self.template()
def __init__(self, context, request):
BrowserView.__init__(self, context, request)
self.getAnalysts = getUsers(context, ['Manager', 'LabManager', 'Analyst'])
self.layout_displaylist = WORKSHEET_LAYOUT_OPTIONS
def select_analyst(self, allow_blank=False, style=None):
self.style = style
self.analysts = getUsers(self.context, ['Manager', 'Analyst', 'LabManager'], allow_blank)
return self.select_analyst_pt()
def folderitem(self, obj, item, index):
# Additional info from AnalysisRequest to be added in the item generated
# by default by bikalisting.
# Call the folderitem method from the base class
item = BikaListingView.folderitem(self, obj, item, index)
if not item:
return None
member = self.mtool.getAuthenticatedMember()
roles = member.getRoles()
hideclientlink = 'RegulatoryInspector' in roles \
and 'Manager' not in roles \
and 'LabManager' not in roles \
and 'LabClerk' not in roles
sample = obj.getSample()
url = obj.absolute_url()
if getSecurityManager().checkPermission(EditResults, obj):
url += "/manage_results"
item['Client'] = obj.aq_parent.Title()
if (hideclientlink == False):
item['replace']['Client'] = "<a href='%s'>%s</a>" % \
(obj.aq_parent.absolute_url(), obj.aq_parent.Title())
item['Creator'] = self.user_fullname(obj.Creator())
item['getRequestID'] = obj.getRequestID()
item['replace']['getRequestID'] = "<a href='%s'>%s</a>" % \
(url, item['getRequestID'])
item['getSample'] = sample
item['replace']['getSample'] = \
"<a href='%s'>%s</a>" % (sample.absolute_url(), sample.Title())
item['replace']['getProfilesTitle'] = ", ".join(
[p.Title() for p in obj.getProfiles()])
analysesnum = obj.getAnalysesNum()
if analysesnum:
item['getAnalysesNum'] = str(analysesnum[0]) + '/' + str(
analysesnum[1])
else:
item['getAnalysesNum'] = ''
batch = obj.getBatch()
if batch:
item['BatchID'] = batch.getBatchID()
item['replace']['BatchID'] = "<a href='%s'>%s</a>" % \
(batch.absolute_url(), item['BatchID'])
else:
item['BatchID'] = ''
val = obj.Schema().getField('SubGroup').get(obj)
item['SubGroup'] = val.Title() if val else ''
sd = obj.getSample().getSamplingDate()
item['SamplingDate'] = \
self.ulocalized_time(sd, long_format=1) if sd else ''
item['getDateReceived'] = \
self.ulocalized_time(obj.getDateReceived())
item['getDatePublished'] = \
self.ulocalized_time(getTransitionDate(obj, 'publish'))
item['getDateVerified'] = \
self.ulocalized_time(getTransitionDate(obj, 'verify'))
deviation = sample.getSamplingDeviation()
item['SamplingDeviation'] = deviation and deviation.Title() or ''
priority = obj.getPriority()
item['Priority'] = '' # priority.Title()
item['getStorageLocation'] = sample.getStorageLocation(
) and sample.getStorageLocation().Title() or ''
item['AdHoc'] = sample.getAdHoc() and True or ''
after_icons = ""
state = self.workflow.getInfoFor(obj, 'worksheetanalysis_review_state')
if state == 'assigned':
after_icons += "<img src='%s/++resource++bika.lims.images/worksheet.png' title='%s'/>" % \
(self.portal_url, t(_("All analyses assigned")))
if self.workflow.getInfoFor(obj, 'review_state') == 'invalid':
after_icons += "<img src='%s/++resource++bika.lims.images/delete.png' title='%s'/>" % \
(self.portal_url, t(_("Results have been withdrawn")))
if obj.getLate():
after_icons += "<img src='%s/++resource++bika.lims.images/late.png' title='%s'>" % \
(self.portal_url, t(_("Late Analyses")))
if sd and sd > DateTime():
after_icons += "<img src='%s/++resource++bika.lims.images/calendar.png' title='%s'>" % \
(self.portal_url, t(_("Future dated sample")))
if obj.getInvoiceExclude():
after_icons += "<img src='%s/++resource++bika.lims.images/invoice_exclude.png' title='%s'>" % \
(self.portal_url, t(_("Exclude from invoice")))
if sample.getSampleType().getHazardous():
after_icons += "<img src='%s/++resource++bika.lims.images/hazardous.png' title='%s'>" % \
(self.portal_url, t(_("Hazardous")))
if after_icons:
item['after']['getRequestID'] = after_icons
item['Created'] = self.ulocalized_time(obj.created())
contact = obj.getContact()
if contact:
item['ClientContact'] = contact.Title()
item['replace']['ClientContact'] = "<a href='%s'>%s</a>" % \
(contact.absolute_url(), contact.Title())
else:
item['ClientContact'] = ""
SamplingWorkflowEnabled = sample.getSamplingWorkflowEnabled()
if SamplingWorkflowEnabled and (not sd or not sd > DateTime()):
datesampled = self.ulocalized_time(sample.getDateSampled(),
long_format=True)
if not datesampled:
datesampled = self.ulocalized_time(DateTime(),
long_format=True)
item['class']['getDateSampled'] = 'provisional'
sampler = sample.getSampler().strip()
if sampler:
item['replace']['getSampler'] = self.user_fullname(sampler)
if 'Sampler' in member.getRoles() and not sampler:
sampler = member.id
item['class']['getSampler'] = 'provisional'
else:
datesampled = ''
sampler = ''
item['getDateSampled'] = datesampled
item['getSampler'] = sampler
# sampling workflow - inline edits for Sampler and Date Sampled
checkPermission = self.context.portal_membership.checkPermission
state = self.workflow.getInfoFor(obj, 'review_state')
if state == 'to_be_sampled' \
and checkPermission(SampleSample, obj) \
and (not sd or not sd > DateTime()):
item['required'] = ['getSampler', 'getDateSampled']
item['allow_edit'] = ['getSampler', 'getDateSampled']
samplers = getUsers(sample, ['Sampler', 'LabManager', 'Manager'])
username = member.getUserName()
users = [({
'ResultValue': u,
'ResultText': samplers.getValue(u)
}) for u in samplers]
item['choices'] = {'getSampler': users}
Sampler = sampler and sampler or \
(username in samplers.keys() and username) or ''
item['getSampler'] = Sampler
# These don't exist on ARs
# XXX This should be a list of preservers...
item['getPreserver'] = ''
item['getDatePreserved'] = ''
# inline edits for Preserver and Date Preserved
checkPermission = self.context.portal_membership.checkPermission
if checkPermission(PreserveSample, obj):
item['required'] = ['getPreserver', 'getDatePreserved']
item['allow_edit'] = ['getPreserver', 'getDatePreserved']
preservers = getUsers(obj, ['Preserver', 'LabManager', 'Manager'])
username = member.getUserName()
users = [({
'ResultValue': u,
'ResultText': preservers.getValue(u)
}) for u in preservers]
item['choices'] = {'getPreserver': users}
preserver = username in preservers.keys() and username or ''
item['getPreserver'] = preserver
item['getDatePreserved'] = self.ulocalized_time(DateTime(),
long_format=1)
item['class']['getPreserver'] = 'provisional'
item['class']['getDatePreserved'] = 'provisional'
# Submitting user may not verify results
if item['review_state'] == 'to_be_verified':
username = member.getUserName()
allowed = api.user.has_permission(VerifyPermission,
username=username)
if allowed and not obj.isUserAllowedToVerify(member):
item['after']['state_title'] = \
"<img src='++resource++bika.lims.images/submitted-by-current-user.png' title='%s'/>" % \
t(_("Cannot verify: Submitted by current user"))
return item
def folderitems(self, full_objects = False):
workflow = getToolByName(self.context, "portal_workflow")
items = BikaListingView.folderitems(self)
props = getToolByName(self.context, 'portal_properties').bika_properties
datepicker_format = props.getProperty('datepicker_format')
for x in range(len(items)):
if not items[x].has_key('obj'): continue
obj = items[x]['obj']
container = obj.getContainer()
items[x]['getContainer'] = container and container.Title() or ''
preservation = obj.getPreservation()
items[x]['getPreservation'] = \
preservation and preservation.Title() or ''
sampler = obj.getSampler().strip()
items[x]['getSampler'] = \
sampler and pretty_user_name_or_id(self.context, sampler) or ''
datesampled = obj.getDateSampled()
items[x]['getDateSampled'] = \
datesampled and TimeOrDate(self.context, datesampled) or ''
preserver = obj.getPreserver().strip()
items[x]['getPreserver'] = \
preserver and pretty_user_name_or_id(self.context, preserver) or ''
datepreserved = obj.getDatePreserved()
items[x]['getDatePreserved'] = \
datepreserved and TimeOrDate(self.context, datepreserved) or ''
disposaldate = obj.getDisposalDate()
items[x]['getDisposalDate'] = \
disposaldate and TimeOrDate(self.context, disposaldate) or ''
samplingdate = obj.getSamplingDate()
# inline edits for Sampler and Date Sampled
checkPermission = self.context.portal_membership.checkPermission
if checkPermission(SampleSample, obj) \
and not samplingdate > DateTime():
items[x]['required'] = ['getSampler', 'getDateSampled']
items[x]['allow_edit'] = ['getSampler', 'getDateSampled']
samplers = getUsers(obj, ['Sampler', 'LabManager', 'Manager'])
getAuthenticatedMember = obj.portal_membership.getAuthenticatedMember
username = getAuthenticatedMember().getUserName()
users = [({'ResultValue': u, 'ResultText': samplers.getValue(u)})
for u in samplers]
items[x]['choices'] = {'getSampler': users}
items[x]['getSampler'] = sampler and sampler or \
(username in samplers.keys() and username) or ''
items[x]['getDateSampled'] = items[x]['getDateSampled'] \
or DateTime().strftime(datepicker_format)
items[x]['class']['getSampler'] = 'provisional'
items[x]['class']['getDateSampled'] = 'provisional'
# inline edits for Preserver and Date Preserved
checkPermission = self.context.portal_membership.checkPermission
if checkPermission(PreserveSample, obj):
items[x]['required'] = ['getPreserver', 'getDatePreserved']
items[x]['allow_edit'] = ['getPreserver', 'getDatePreserved']
preservers = getUsers(obj, ['Preserver', 'LabManager', 'Manager'])
getAuthenticatedMember = obj.portal_membership.getAuthenticatedMember
username = getAuthenticatedMember().getUserName()
users = [({'ResultValue': u, 'ResultText': preservers.getValue(u)})
for u in preservers]
items[x]['choices'] = {'getPreserver': users}
items[x]['getPreserver'] = preserver and preserver or \
(username in preservers.keys() and username) or ''
items[x]['getDatePreserved'] = items[x]['getDatePreserved'] \
or DateTime().strftime(datepicker_format)
items[x]['class']['getPreserver'] = 'provisional'
items[x]['class']['getDatePreserved'] = 'provisional'
return items
def select_user(self):
self.users = getUsers(self.context, ['Manager', 'LabManager', 'LabClerk', 'Analyst', 'Sampler', 'Preserver', 'Verifier'])
return self.select_user_pt()
