def save_publication(self, project_id):
from designsafe.apps.api.agave.filemanager.public_search_index import Publication
from designsafe.apps.api.projects.managers import publication as PublicationManager
try:
pub = Publication(project_id=project_id)
publication = PublicationManager.reserve_publication(pub.to_dict())
pub.update(**publication)
except Exception as exc:
logger.error('Proj Id: %s. %s', project_id, exc, exc_info=True)
raise self.retry(exc=exc)
def save_to_fedora(self, project_id):
import requests
import magic
from designsafe.apps.api.agave.filemanager.public_search_index import Publication
try:
pub = Publication(project_id=project_id)
pub.update(status='published')
_root = os.path.join('/corral-repl/tacc/NHERI/published', project_id)
fedora_base = 'http://fedoraweb01.tacc.utexas.edu:8080/fcrepo/rest/publications_01'
res = requests.get(fedora_base)
if res.status_code == 404 or res.status_code == 410:
requests.put(fedora_base)
fedora_project_base = ''.join([fedora_base, '/', project_id])
res = requests.get(fedora_project_base)
if res.status_code == 404 or res.status_code == 410:
requests.put(fedora_project_base)
headers = {'Content-Type': 'text/plain'}
#logger.debug('walking: %s', _root)
for root, dirs, files in os.walk(_root):
for name in files:
mime = magic.Magic(mime=True)
headers['Content-Type'] = mime.from_file(
os.path.join(root, name))
#files
full_path = os.path.join(root, name)
_path = full_path.replace(_root, '', 1)
_path = _path.replace('[', '-')
_path = _path.replace(']', '-')
url = ''.join([fedora_project_base, urllib.quote(_path)])
#logger.debug('uploading: %s', url)
with open(os.path.join(root, name), 'rb') as _file:
requests.put(url, data=_file, headers=headers)
for name in dirs:
#dirs
full_path = os.path.join(root, name)
_path = full_path.replace(_root, '', 1)
url = ''.join([fedora_project_base, _path])
#logger.debug('creating: %s', _path)
requests.put(url)
except Exception as exc:
logger.error('Proj Id: %s. %s', project_id, exc)
raise self.retry(exc=exc)
def set_publish_status(self, project_id):
from designsafe.apps.api.agave.filemanager.public_search_index import Publication
pub = Publication(project_id=project_id)
pub.update(status='published')