def test_fourier():
input_map = dict(
args=dict(argstr='%s', ),
environ=dict(usedefault=True, ),
highpass=dict(
argstr='-highpass %f',
mandatory=True,
),
ignore_exception=dict(usedefault=True, ),
in_file=dict(
argstr='%s',
mandatory=True,
),
lowpass=dict(
argstr='-lowpass %f',
mandatory=True,
),
out_file=dict(argstr='-prefix %s', ),
outputtype=dict(),
)
instance = afni.Fourier()
for key, metadata in input_map.items():
for metakey, value in metadata.items():
yield assert_equal, getattr(instance.inputs.traits()[key],
metakey), value
def __init__(self, in_file='path', lowpass=0.005, highpass=0.1, **options):
from nipype.interfaces import afni
fourier = afni.Fourier()
fourier.inputs.in_file = in_file
fourier.inputs.lowpass = lowpass
fourier.inputs.highpass = highpass
for ef in options:
setattr(fourier.inputs, ef, options[ef])
self.res = fourier.run()