def run_from_terminal():
"""Run ontology2dot from the terminal."""
# Parse the user arguments
parser = argparse.ArgumentParser(
description="Convert an ontology in OWL format to "
"an ontology in YAML format."
)
parser.add_argument("to_plot", metavar="to_plot",
type=str, nargs="+",
help="Either installed namespaces or paths "
"to yaml ontology files")
parser.add_argument("--output-filename", "-o",
type=os.path.abspath, default=None,
help="The name of the output file")
parser.add_argument("--group", "-g",
action="store_true",
help="Whether to organize each namespace in a "
"separate cluster")
args = parser.parse_args()
namespaces = list()
parser = Parser(_namespace_registry._graph)
for x in args.to_plot:
if x in _namespace_registry:
namespaces.append(x)
continue
for n in Parser.get_namespace_names(x):
if n in _namespace_registry:
logger.warning("Using installed version of namespace %s" % n)
namespaces.append(_namespace_registry[n])
else:
parser.parse(x)
_namespace_registry.update_namespaces()
namespaces.append(_namespace_registry[n])
# Convert the ontology to dot
converter = Ontology2Dot(
namespaces=namespaces,
output_filename=args.output_filename,
group=args.group
)
converter.render()
from osp.core.session import DbWrapperSession
from osp.core.session.transport.transport_session_server import \
TransportSessionServer
try:
from tests.test_sqlite_city import check_state
except ImportError:
from test_sqlite_city import check_state
try:
from osp.core.namespaces import city
except ImportError:
from osp.core.ontology import Parser
from osp.core.namespaces import _namespace_registry
Parser(_namespace_registry._graph).parse("city")
_namespace_registry.update_namespaces()
city = _namespace_registry.city
HOST = "127.0.0.1"
PORT = 8681
URI = f"ws://{HOST}:{PORT}"
DB = "dataspace.db"
class TestDataspaceWrapper(unittest.TestCase):
"""Test the DataspaceWrapper."""
SERVER_STARTED = False
@classmethod
def setUpClass(cls):
ch.setFormatter(formatter)
logger.addHandler(ch)
logging.getLogger("osp.wrappers").addHandler(ch)
try:
from osp.core.packageinfo import VERSION as __version__
except ModuleNotFoundError:
__version__ = None
logger.critical(
"Error determining version of osp-core. If you installed from source, "
"try the follwing: \n"
"\t- If you want to import osp-core with the osp-core repo as cwd, "
"please reinstall using `pip install -e <path/to/osp-core/repo>`. \n"
"\t- Otherwise you can reinstall using "
"`pip install <path/to/osp-core/repo>`.")
def __getattr__(name):
if name != "load_tests":
logger.warning(f"osp.core.{name} is deprecated. "
f"Use osp.core.namespaces.{name} instead.")
return getattr(osp.core.namespaces, name)
if (sys.version_info.major, sys.version_info.minor) <= (3, 6):
logger.info("We recommend using a python version of at least 3.7")
logger.info(f"osp.core.<namespace> is deprecated. "
f"Use osp.core.namespaces.<namespace> instead.")
_namespace_registry.update_namespaces(
modules=[sys.modules[__name__], namespaces])