def reset(self):
BaseTracTool.reset(self)
self._executed_stock_worklists = None
self.__log_file_stream = None
self._log_file_attachment = None
self._comment = None
self._ticket_number = None
def reset(self):
"""
Resets all value except for the instantiation arguments.
"""
BaseTracTool.reset(self)
self._ticket_id = None
self._update_wrapper = None
self._comment = None
def reset(self):
"""
Resets all values except for the instantiation values.
"""
BaseTracTool.reset(self)
self.__experiment_type_id = None
self.__comment = None
self.__description = dict()
self.__excel_stream = None
self.__info_stream = None
self.__assign_stream = None
self.__attachments = []
def reset(self):
"""
Resets all values except for the instantiation values.
"""
BaseTracTool.reset(self)
self.__experiment_type_id = None
self.__comment = None
self.__description = dict()
self.__excel_stream = None
self.__info_stream = None
self.__assign_stream = None
self.__attachments = []
def __init__(self, requester, experiment_metadata, parent=None):
"""
Constructor.
:param experiment_metadata_label: The new experiment metadata.
:type experiment_metadata_label:
:class:`thelma.entities.experiment.ExperimentMetadata`
:param requester: The user who will be owner and reporter of the ticket.
:type requester: :class:`thelma.entities.user.User`
"""
BaseTracTool.__init__(self, parent=parent)
#: The user creating the experiment metadata is also reporter and
#: and owner of the ticket.
self.requester = requester
#: The new experiment metadata.
self.experiment_metadata = experiment_metadata
#: The ticket wrapper storing the value applied to the ticket.
self._ticket = None
def __init__(self, id_providing_entity, parent=None):
"""
Constructor.
:param id_providing_entity: The entity providing the ticket ID.
:type id_providing_entity:
:class:`thelma.entities.experiment.ExperimentMetadata` or
:class:`thelma.entities.iso.IsoRequest`
"""
BaseTracTool.__init__(self, parent=parent)
#: The experiment metadata or ISO request object the ticket belongs to.
self.id_providing_entity = id_providing_entity
#: The ticket ID.
self._ticket_id = None
#: The wrapper for the ticket update.
self._update_wrapper = None
#: A comment for the update. If the comment is not set, it will
#: replaced by the :attr:`BASE_COMMENT`.
self._comment = None
def __init__(self, requester, iso_label, layout_number, parent=None):
"""
Constructor.
:param requester: The user who will be owner and reporter of the ticket.
:type requester: :class:`thelma.entities.user.User`
:param str iso_label: The label of the ISO this ticket belongs to.
:param int layout_number: References the serial number ID of the ISO
(within the ISO request space).
"""
BaseTracTool.__init__(self, parent=parent)
#: The user who will be owner and reporter of the ticket (corresponds
#: the requester of the ISO request).
self.requester = requester
#: The label of the ISO this ticket belongs to.
self.iso_label = iso_label
#: References the library layout the ISO is created for.
self.layout_number = layout_number
#: The ticket wrapper storing the value applied to the ticket.
self._ticket = None
def __init__(self, executor, parent=None):
"""
Constructor.
:param executor: The executor tool (after run has been completed).
:type executor: :class:`StockTransferWriterExecutor` subclass
"""
BaseTracTool.__init__(self, parent=parent)
#: The tool that has conducted the execution.
self.executor = executor
#: The executed stock transfer worklists (for reporting).
self._executed_stock_worklists = None
#: The stream for the log file.
self.__log_file_stream = None
#: The attachment for the ticket (for the log file).
self._log_file_attachment = None
#: The completed ticket comment.
self._comment = None
#: The ticket number.
self._ticket_number = None
def __init__(self, requester, iso_label, layout_number, parent=None):
"""
Constructor.
:param requester: The user who will be owner and reporter of the ticket.
:type requester: :class:`thelma.entities.user.User`
:param str iso_label: The label of the ISO this ticket belongs to.
:param int layout_number: References the library layout the ISO is
created for.
"""
BaseTracTool.__init__(self, parent=parent)
#: The user who will be owner and reporter of the ticket (corresponds
#: the requester of the ISO request).
self.requester = requester
#: The label of the ISO this ticket belongs to.
self.iso_label = iso_label
#: References the library layout the ISO is created for.
self.layout_number = layout_number
#: The ticket wrapper storing the value applied to the ticket.
self._ticket = None
def __init__(self, stock_sample_creation_iso, file_map, parent=None):
"""
Constructor:
:param stock_sample_creation_iso: The stock sample creation ISO the
worklists belong to (also contains the ticket ID).
:type stock_sample_creation_iso:
:class:`thelma.entities.library.LibraryCreationIso`
:param file_map: The streams for the worklists files mapped onto
file names.
:type file_map: :class:`dict`
"""
BaseTracTool.__init__(self, parent=parent)
#: The library creation ISO the worklists belong to (also contains
#: the ticket ID).
self.stock_sample_creation_iso = stock_sample_creation_iso
#: The streams for the worklists files mapped onto file names.
self.file_map = file_map
def __init__(self,
generator,
experiment_metadata_link,
iso_request_link,
parent=None):
"""
Constructor.
:param generator: The generator that has conducted the upload.
:type generator: :class:`ExperimentMetadataGenerator`
:param str experiment_metadata_link: Link to the experiment metadata in
TheLMA.
:param str iso_request_link: Link to the ISO request in TheLMA.
"""
BaseTracTool.__init__(self, parent=parent)
#: The generator that has conducted the upload.
self.generator = generator
#: Link to the experiment metadata in TheLMA.
self.experiment_metadata_link = experiment_metadata_link
#: Link to the ISO request in TheLMA.
self.iso_request_link = iso_request_link
#: The ID of the :class:`ExperimentMetadataType` for the uploaded
#: metadata.
self.__experiment_type_id = None
#: The comment to be sent along with the files.
self.__comment = None
#: A dictionary containing the requested changes (key: attribute name,
#: value: attribute value).
self.__description = None
#: The file stream of the uploaded excel data.
self.__excel_stream = None
#: The file stream for Info TXT file.
self.__info_stream = None
#: The file stream for the assignment file.
self.__assign_stream = None
#: The file stream for ISO plate overview file.
self.__iso_stream = None
#: The attachment to be uploaded.
self.__attachments = None
def __init__(self, generator, experiment_metadata_link, iso_request_link,
parent=None):
"""
Constructor.
:param generator: The generator that has conducted the upload.
:type generator: :class:`ExperimentMetadataGenerator`
:param str experiment_metadata_link: Link to the experiment metadata in
TheLMA.
:param str iso_request_link: Link to the ISO request in TheLMA.
"""
BaseTracTool.__init__(self, parent=parent)
#: The generator that has conducted the upload.
self.generator = generator
#: Link to the experiment metadata in TheLMA.
self.experiment_metadata_link = experiment_metadata_link
#: Link to the ISO request in TheLMA.
self.iso_request_link = iso_request_link
#: The ID of the :class:`ExperimentMetadataType` for the uploaded
#: metadata.
self.__experiment_type_id = None
#: The comment to be sent along with the files.
self.__comment = None
#: A dictionary containing the requested changes (key: attribute name,
#: value: attribute value).
self.__description = None
#: The file stream of the uploaded excel data.
self.__excel_stream = None
#: The file stream for Info TXT file.
self.__info_stream = None
#: The file stream for the assignment file.
self.__assign_stream = None
#: The file stream for ISO plate overview file.
self.__iso_stream = None
#: The attachment to be uploaded.
self.__attachments = None
def reset(self):
BaseTracTool.reset(self)
self._ticket = None
def reset(self):
BaseTracTool.reset(self)
self._ticket = None
def reset(self):
"""
Resets all value except for the instantiation arguments.
"""
BaseTracTool.reset(self)
self._ticket = None