Install dependencies

$ pip install -r requirements.txt

Run the server locally with

# WSGI object is web:app
$ python web.py

If you modified one of SNPData.csv and DrugInfo.csv or you wish to update comparison between genotypes in these two files and data from 1000 Genomes, you should use command below to update your changes. Note that this requires you to modify config.py and set GOOGLE_API_KEY to your API key, because process_data.py relies on Google Genomics API for getting data from 1000 Genomes. Currently we only support Goolge Genomics because other implementations of GA4GH's Variant API haven't conformed fully to the GA4GH's documentations yet.

$ python process_data.py