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DataMole

A Qt-based graphical tool for processing and exploring tabular datasets (CSV) in machine learning and data analysis projects.

Note that DataMole is still experimental and under development.

Table of Contents

Features

  • Import and export CSV dataset
  • Apply transformations using the graphical interface:
    • Fill missing values
    • Replace values
    • Discretize numeric columns or datetimes attributes
    • Scale columns
    • One-hot encode
    • Add/remove columns
    • Join two tables
    • Convert types (e.g. numeric -> string)
    • Extract time series information from longitudinal datasets
  • Draw scatterplots and line charts for time series
  • Get data statistics (histogram, mean, std, etc.)
  • Create pipelines of transformations and execute them
  • Import and export pipelines (in pickle)

Screenshots

DataMole main window Scatterplot matrix on iris dataset Preprocessing pipeline

Installation

  1. Install Python >= 3.8.0
  2. Open a terminal. On Windows 10 use the Windows PowerShell
  3. Create a virtualenv (*):
    • Install virtualenv: python -m pip install virtualenv
    • Move in the main dataMole folder (the one with main.py)
    • Create a virtualenv: python -m virtualenv venv
    • Activate it: source ./venv/bin/activate (.\venv\Scripts\Activate.ps1 on Windows)
  4. With the active virtualenv, install dependencies: python -m pip install -r requirements.txt
  5. Generate Qt resources: make resources (**)
  6. Start software with python main.py

(*) Of course you can just use the global Python installation if you are ok with that (not recommended)

(**) On Windows make command does not work, so the command to give at step 5 is:

  • pyside2-rcc dataMole/resources.qrc -o dataMole/qt_resources.py

This will generate a new file qt_resources.py.

Software usage

Refer to the user manual in docs/manuals

Developer info

In addition to the packages listed in requirements.txt you may want to install the ones listed in requirements.dev.txt.

Refer to the developer manual in docs/manuals for information about software architecture and on how to extend it.

Manuals .tex source files are in docs/manuals/source folder.

Building documentation with Sphinx

  1. Move into the docs folder
  2. Generate stubs (rst) if required: make stubs
  3. Generate documentation:
    • make html for html documentation
    • make pdf to convert the documentation in a single pdf file

The output will be found in the auto/build directory.

Use make clean to remove the build directory.

Credits

Here is a list of third party software used within this project.