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AGI-Bio

Prototype project utilizing the OpenCog framework for genomic research. In particular it aims at experimenting with cognitive synergy between MOSES, PLN and other OpenCog components.

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Description

-- moses-scripts -- scripts for importing MOSES models into the atomspace and applying PLN

-- knowledge-import -- scripts for converting external knowledge bases into scheme files for importing into the atomspace

-- bioscience - code to be built and run with the cogserver

-- generated bio data is in separate repo here: git@gitlab.com:opencog-bio/bio-data.git

Note from Nil: I don't know what's the right way to organize the folders, I just added my work under moses-scripts, although those scripts cover in fact more than MOSES.

Note from Eddie: Not sure what's the best way to organize the folders either. In particular, the best way to organize the code to be built and run with the cogserver, which at present consists of just the custom atom types. Currently I have instructions in the readme to copy the directory to the opencog root dir. But then this will need to be redone any time there are updates to this code in the repo.

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  • Scheme 51.7%
  • Python 34.7%
  • Shell 8.7%
  • R 3.4%
  • Other 1.5%