GitHub - harvardinformatics/iggybase: iggybase is a general database frontend. First, we are rolling it out as Laboratory Information Management System (LIMS).

Branches Tags

Name		Name	Last commit message	Last commit date
Latest commit History 1,243 Commits
files/charge_method		files/charge_method
iggybase		iggybase
scripts		scripts
.gitignore		.gitignore
apache_conf		apache_conf
dupe_roles.py		dupe_roles.py
iggybase.wsgi		iggybase.wsgi
initial_admin.sql		initial_admin.sql
make_fields.py		make_fields.py
readme		readme
requirements.txt		requirements.txt
run.py		run.py
setup.py		setup.py
shell.py		shell.py
updategit		updategit

Repository files navigation

install python 3.4.1

sudo yum groupinstall "Development tools"
sudo yum install zlib-devel bzip2-devel openssl-devel ncurses-devel sqlite-devel readline-devel tk-devel gdbm-devel db4-devel libpcap-devel xz-devel
sudo vim /etc/ld.so.conf
add '/usr/local/lib'
wget https://www.python.org/ftp/python/3.4.1/Python-3.4.1.tar.xz
tar xf Python-3.4.1.tar.xz
cd Python-3.4.1
sudo ./configure --prefix=/usr/local --enable-shared LDFLAGS="-Wl,-rpath /usr/local/lib"
sudo make 
sudo make altinstall

Install 3.4 version of mod_wsgi

wget https://github.com/GrahamDumpleton/mod_wsgi/archive/4.4.12.tar.gz
tar xf 4.4.12.tar.gz
./configure --with-python=/n/informatics/iggybase/iggybase_env/bin/python3.4
sudo make
sudo make install
sudo ln -s /usr/local/lib/libpython3.4m.so /usr/lib64/libpython3.4m.so
sudo ln -s /usr/local/lib/libpython3.4m.so.1.0 /usr/lib64/libpython3.4m.so.1.0

create virtual environment

python3.4 -m venv iggybase_env

install flask and packages
--------------------------
pip install -r requirements.txt