GitHub - hjanime/pyNGSQC: A pure-python next-gen sequencing quality control library, and soon to be command line tool

Branches Tags

Name		Name	Last commit message	Last commit date
Latest commit History 141 Commits
pyngsqc		pyngsqc
test		test
.gitignore		.gitignore
.travis.yml		.travis.yml
README		README

Repository files navigation

pyNGSQC

pyNGSQC is a python re-write of many of the functions of the fastx tookit,
seqtk, FastQC and other similar next-gen sequencing quality control tools

It is designed to be fast (and particularly, compatible with PyPy), memory
efficient, and import-able into existing or new python programs or pipelines.

It is currently (9/Sep/12) in pre-alpha stage