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Demo of how Open Humans to OpenClinica workflow can work

Install

Assumes you have a basic understanding of how Django, pipenv, & heroku work:

  • pipenv install
  • pipenv shell
  • heroku local:run python manage.py migrate
  • heroku local

Web-server should be up on 127.0.0.1:5000

Setup

Copy the env.sample as .env and fill in the missing bits. Required:

  • An Open Humans project
  • Having a Participate enabled Open Clinica survey and the corresponding token to add participants etc.

Demo deployment runs on https://opensurveytest.herokuapp.com/

Logging in with Open Humans will:

  • Create Open Clinica participant
  • Schedule first survey for them
  • Get participant access survey_token
  • Email this via Open Humans to just registered participant

Design dev

Assumes you have a basic understanding of how node and yarn/npm work.
Node version used: 12.16.1

We use PostCSS to enhance browser compatibility, accessibility and preformances.
A package.json and a postcss.config.js config file exist at the document root. Add or remove plugin from there.

In order to edit the styles, you need to:

  • run yarn install or npm i
  • edit the styles in src > css > parts
  • run yarn watch or npm run watch while in developement (watches the changes)
  • run yarn build or npm run dev for production

The optimized and minified style file is under static > css

Translations / i18n

#### Activate a new language

To activate a new language edit the LANGUAGES setting in settings.py

LANGUAGES = [
  ('en', _('English')),
  ('fr', _('French')),
  ('de', _('German')),
]

You need to do this first before translating because the language name itself needs to be translated.

Add a new language

To add a new language simply add a new directory in /locale with the language code as name, for example: /locale/fr for french.

Then to generate the translation files run:

python manage.py makemessages

It will create django.po files inside each /<lang>/LC_MESSAGES directory.

You can edit these files directly with any text editor or specialized software / web application.

Once the translations are complete, to generate the binary files optimized for consumption by Django, run:

python manage.py compilemessages

It will create django.mo files inside each /<lang>/LC_MESSAGES directory.

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  • HTML 73.0%
  • Python 18.0%
  • CSS 7.5%
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