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Dev-Friendly Rewrite of H2O with Spark API

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H2O

H2O makes Hadoop do math! H2O scales statistics, machine learning and math over BigData. H2O is extensible and users can build blocks using simple math legos in the core. H2O keeps familiar interfaces like R, Excel & JSON so that BigData enthusiasts & experts can explore, munge, model and score datasets using a range of simple to advanced algorithms. Data collection is easy. Decision making is hard. H2O makes it fast and easy to derive insights from your data through faster and better predictive modeling. H2O has a vision of online scoring and modeling in a single platform.

Product Vision for first cut

H2O product, the Analytics Engine will scale Classification and Regression.

  • RandomForest, Generalized Linear Modeling (GLM), logistic regression, k-Means, available over R / REST / JSON-API
  • Basic Linear Algebra as building blocks for custom algorithms
  • High predictive power of the models
  • High speed and scale for modeling and scoring over BigData

Data Sources

  • We read and write from/to HDFS, S3, NoSQL, SQL
  • We ingest data in CSV format from local and distributed filesystems (nfs)
  • A JDBC driver for SQL and DataAdapters for NoSQL datasources is in the roadmap. (v2)

Console provides Adhoc Data Analytics at scale via R-like Parser on BigData

  • Able to pass and evaluate R-like expressions, slicing and filters make this the most powerful web calculator on BigData

Users

Primary users are Data Analysts looking to wield a powerful tool for Data Modeling in the Real-Time. Microsoft Excel, R, SAS wielding Data Analysts and Statisticians. Hadoop users with data in HDFS will have a first class citizen for doing Math in Hadoop ecosystem. Java and Math engineers can extend core functionality by using and extending legos in a simple java that reads like math. See package hex. Extensibility can also come from writing R expressions that capture your domain.

Design

We use the best execution framework for the algorithm at hand. For first cut parallel algorithms: Map Reduce over distributed fork/join framework brings fine grain parallelism to distributed algorithms. Our algorithms are cache oblivious and fit into the heterogeneous datacenter and laptops to bring best performance. Distributed Arraylets & Data Partitioning to preserve locality. Move code, not data, not people.

Extensions

One of our first powerful extension will be a small tool belt of stats and math legos for Fraud Detection. Dealing with Unbalanced Datasets is a key focus for this. Users will use JSON/REST-api via H2O.R through connects the Analytics Engine into R-IDE/RStudio.

Using H2O Dev Artifacts

Find H2O Dev on Maven Central via http://search.maven.org/#search%7Cga%7C1%7Cai.h2o

Building H2O Dev

Getting started with H2O development requires JDK 1.7, Node.js, and Gradle. We use the Gradle wrapper (called gradlew) to ensure an up-to-date local version of Gradle and other dependencies are installed in your development directory.

Setup on Windows

Step 1. Install JDK

Install Java 1.7 and add the appropriate directory C:\Program Files\Java\jdk1.7.0_65\bin with java.exe to PATH in Environment Variables. Check to make sure the command prompt is detecting the correct Java version by running:

javac -version

Step 2. Install Node.js and npm

Install Node.js and add installed directory C:\Program Files\nodejs that should include node.exe and npm.cmd to PATH if it isn't already prepended.

Step 3. Install R and the required packages

Install R and add the preferred bin\i386 or bin\x64 directory to your PATH.

Note: Acceptable versions of R are >= 2.13 && <= 3.0.0 && >= 3.1.1.

Install the following R packages: RCurl, rjson, statmod, and bitops.

cd Downloads
R CMD INSTALL RCurl_x.xx-x.x.zip
R CMD INSTALL rjson_x.x.xx.zip
R CMD INSTALL statmod_x.x.xx.zip
R CMD INSTALL bitops_x.x-x.zip

You may alternatively install these packages from within an R session:

install.packages("rjson") install.packages("RCurl") install.packages("statmod") install.packages("bitops")

Step 4. Git Clone h2o-dev

If you don't already have a Git client, please install one. The default one can be found here http://git-scm.com/downloads . Make sure that during the install command prompt support is turned on.

Download and update h2o-dev source codes:

git clone https://github.com/0xdata/h2o-dev

Step 5. Run the top-level gradle build:

cd h2o-dev
gradlew.bat build

If you encounter errors run again with --stacktrace for more instructions on missing dependencies.

Setup on OS X

If you don't have Homebrew install, please consider it. It makes package management for OS X easy.

Step 1. Install JDK

Install Java 1.7. Check to make sure the command prompt is detecting the correct Java version by running:

javac -version

Step 2. Install Node.js and npm

Using Hombrew:

brew install node

Otherwise install from the NodeJS website.

Step 3. Install R and the required packages

Install R and add the bin directory to your PATH if not already included.

Install the following R packages: RCurl, rjson, statmod, and bitops.

cd Downloads
R CMD INSTALL RCurl_x.xx-x.x.tgz
R CMD INSTALL rjson_x.x.xx.tgz
R CMD INSTALL statmod_x.x.xx.tgz
R CMD INSTALL bitops_x.x-x.tgz

Step 4. Git Clone h2o-dev

OS X should have come with Git installed, so just download and update h2o-dev source codes:

git clone https://github.com/0xdata/h2o-dev

Step 5. Run the top-level gradle build:

cd h2o-dev
./gradlew build

If you encounter errors run again with --stacktrace for more instructions on missing dependencies.

Setup on Ubuntu 14.04

Step 1. Install Node.js and npm

sudo apt-get install npm
sudo ln -s /usr/bin/nodejs /usr/bin/node

Step 2. Install JDK

Install Java 1.7. Installation instructions can be found here JDK installation. Check to make sure the command prompt is detecting the correct Java version by running:

javac -version

Step 3. Git Clone h2o-dev

If you don't already have a Git client,

sudo apt-get install git

Download and update h2o-dev source codes:

git clone https://github.com/0xdata/h2o-dev

Step 4. Run the top-level gradle build:

cd h2o-dev
./gradlew build

If you encounter errors run again with --stacktrace for more instructions on missing dependencies.

Make sure that you are not running as root since bower will reject such a run

Setup on Ubuntu 13.10

Step 1. Install Node.js and npm

On Ubuntu 13.10, the default Node.js (v0.10.15) is sufficient, but the default npm (v1.2.18) is too old, so we use a fresh install from the npm website.

sudo apt-get install node
sudo ln -s /usr/bin/nodejs /usr/bin/node
wget http://npmjs.org/install.sh
sudo apt-get install curl
sudo sh install.sh

Step 2-4. Follow steps 2-4 for Ubuntu 14.04

Setting up your preferred build environment

For users of Intellij's IDEA, project files can be generated with:

./gradlew idea

For users of Eclipse, project files can be generated with:

./gradlew eclipse

Community

We will breathe & sustain a vibrant community with the focus of taking software engineering approach to data science and empower everyone interested in data to be able to hack data using math and algorithms. Join us on google groups h2ostream.

Team & Committers

SriSatish Ambati
Cliff Click
Tom Kraljevic
Tomas Nykodym
Michal Malohlava
Kevin Normoyle
Spencer Aiello
Anqi Fu
Nidhi Mehta
Arno Candel
Josephine Wang
Amy Wang
Max Schloemer
Ray Peck
Prithvi Prabhu
Patrick Aboyoun
Brandon Hill
Radu Munteanu
Jeff Gambera
Ariel Rao
Viraj Parmar
Kendall Harris
Anna Chavez
Anand Avati
Joel Horwitz
Jessica Lanford

Advisors

Scientific Advisory Council

Stephen Boyd
Rob Tibshirani
Trevor Hastie

Systems, Data, FileSystems and Hadoop

Doug Lea
Chris Pouliot
Dhruba Borthakur
Charles Zedlewski

Investors

Jishnu Bhattacharjee, Nexus Venture Partners
Anand Babu Periasamy
Anand Rajaraman
Ash Bhardwaj
Rakesh Mathur
Michael Marks

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Dev-Friendly Rewrite of H2O with Spark API

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