mzhKU/BioFET-SIM-CMD
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************************************ BioFET-SIM Command Line Version (CMD) ************************************ This is the Github repository for the command line version of the BioFET-SIM method. Please cite the following articles in work making use of the method: http://pubs.rsc.org/en/Content/ArticleLanding/2011/NR/c0nr00442a http://pubs.rsc.org/en/Content/ArticleLanding/2011/NR/c1nr10316d http://arxiv.org/abs/1204.6140 You can find an introduction to the method at the following URL: http://proteinsandwavefunctions.blogspot.dk/2012/05/biofet-sim-web-interface-implementation.html The webinterface to the BioFET-SIM method can be found at: http://www.biofetsim.org Example of command line screening of variable: $ for i in {9738937,973893,97389,9738,937} do python bio_run.py --set num_prot $i 1AVD.bfs python bio_run.py --calc 1AVD.bfs done Use 'grep' to parse for sensitivity output
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Command line version of the BioFET-SIM method
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