-
Notifications
You must be signed in to change notification settings - Fork 0
/
main_STC.py
168 lines (145 loc) · 5.58 KB
/
main_STC.py
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
import networkx as nx
import numpy as np
import matplotlib.pyplot as plt
import copy
import time
import os.path
import pickle
import sys
def get_rID(sets):
# preprocess
rID = dict()
for ID, team in sets.items():
for user in team:
if not user in rID: rID[user] = set()
rID[user].add(ID)
return rID
def hascf(sets):
for k in sets.keys():
for k2 in sets.keys():
if k!=k2 and sets[k].issubset(sets[k2]):
k,k2 = ID,ID2
print ID, 'is subcommunity of', ID2
return True
return False
def write_processed_sets(G, sets, name):
pickle.dump((G,sets), open(os.path.join('UnderlyingNetwork', name +'.dat'),'wb') )
def quchong(sets):
for k in sets.keys(): sets[k] = set(sets[k])
team_list = sorted(sets.items(), key=lambda x:len(x[-1]))
for it in range(len(team_list)):
ID, team = team_list[it]
for jt in range(it+1, len(team_list)):
ID2, team2 = team_list[jt]
if team.issubset(team2):
del sets[ID] # sets.pop(ID)
print ID, 'is subcommunity of', ID2
break
return sets
# get Gteams: Graph for every team
def getDataGraph(sets, G): # sets: teams
Gteams = {}
for k in sets.keys():
g = G.subgraph(sets[k])
if g.number_of_nodes() >= 2:
if nx.is_connected(g):
Gteams[k] = copy.deepcopy(g)
sets[k] = set(copy.deepcopy(g.nodes()))
else:
flag = False
sets[k] = set()
for Gc in nx.connected_component_subgraphs(g):
if Gc.number_of_nodes() >= 2: # max(2, len(sets[k])):
flag = True
Gteams[k] = copy.deepcopy(Gc)
sets[k] = set(copy.deepcopy(Gc.nodes()))
if not flag: # if not exist 2 connected nodes
del sets[k]
else:
del sets[k]
sets = quchong(sets)
return sets, Gteams
def getAllOpenTriangles(G, sets): # open[(u,v)]: third edge of open triangles (u,v) in
opens = {} # reverse: node --> teamID
index = {}
# close = {}
for v in nx.nodes_iter(G):
s1 = set(G[v])
for w in s1:
s2 = set(G[w])
pair = (v,w) if v < w else (w,v)
if pair not in opens:
opens[pair] = set()
# close[pair] = set()
else: # add following two lines
continue
opens[pair] |= set([(i,v) if i < v else (v,i) for i in (s1 - s2 - set([w]))])
opens[pair] |= set([(i,w) if i < w else (w,i) for i in (s2 - s1 - set([v]))])
# close[pair] = s1 & s2
for teamID, nodes in sets.iteritems():
if v in nodes and w in nodes:
if pair not in index:
index[pair] = set()
index[pair].add(teamID) # which teams edge(v,w) belongs to
for pair in opens:
if opens[pair].empty(): del opens[pair]
return opens, index
def hasCycles(Gteams, index, e): # index: teamIDs_of_edge
out = True # whether remove e would result in some team disconnected
if e in index:
for team in index[e]: # for every team e belong to -
g = Gteams[team]
g.remove_edge(*e)
out = nx.has_path(g, e[0], e[1])
g.add_edge(*e)
if out == False:
return out
return out
def updateOpens(opens, e):
for k in opens[e]:
opens[k].remove(e)
del opens[e]
return opens
def main(Gteams, sets):
opens, index = getAllOpenTriangles(G, sets)
print 'initial number of open (violated) triangles:', sum([len(i) for i in opens.values()])/2
backup_opens = opens
Strong = set([(i,j) if i < j else (j,i) for (i,j) in G.edges()])
Weak = set()
unremovable = []
tic = time.time()
edge_list = opens.items()
edge_list = sorted(edge_list, key=lambda x:x[-1], reverse=True)
edge_list = [x[0] for x in edge_list]
for e in edge_list:
violScore = len(opens[e])
to_remove = e
if violScore<=0: break
canDelete = hasCycles(Gteams, index, to_remove)
if canDelete:
if to_remove in index:
for gID in index[to_remove]: #Gteams.values():
g = Gteams[gID]
if g.has_edge(*to_remove):
g.remove_edge(*to_remove)
opens = updateOpens(opens, to_remove)
Strong.remove(to_remove)
Weak.add(to_remove)
print 'running time:', time.time() - tic
print 'resulting number of violations: ', (sum([len(i) for i in opens.values()]))
print 'number of strong and weak edges:'
print len(Strong), len(Weak)
pickle.dump((Gteams, sets, Strong, Weak), open('out' + name + '.p0', "wb"))
# TODO: preprocess node->community, edge->community(subgraph)
if __name__ == '__main__':
#name = sys.argv[1]
name = 'lastFM_tags'
G, init_sets = pickle.load(open(os.path.join('UnderlyingNetwork', name +'.pkl'),'rb'))
print 'Data: ', name
print 'number of nodes and edges in the graph:'
print G.number_of_nodes(), G.number_of_edges()
sets = init_sets
sets, Gteams = getDataGraph(sets, G)
print 'number of sets:', len(sets)
main(Gteams, sets)
# pickle.dump((Gteams, sets, opens, Strong, Weak), open('out/'+name + '.open', "wb"))