Functions to register and analyse cell tracks based on Pandas and Vtk (thus Python2 only):
There is also a function that adds a cell_id column to the DataFrame by tracing the lineage, like this:
id_center id_mother timestep Division cell_id
0 1000 0 1 False 0
1 1001 1000 2 False 0
2 1002 1001 3 False 0
3 1003 1002 4 False 0
4 1004 1003 5 False 0
5 2000 0 1 False 1
6 2001 2000 2 True 1
7 2002 2001 3 False 2
8 2003 2001 3 False 3
9 2004 2002 4 False 2
10 2005 2003 4 False 3
11 2006 2004 5 False 2
12 3000 666 10 False 4
13 3001 3000 11 False 4
14 3002 3001 12 False 4
15 4000 666 10 False 5
16 4001 4000 11 False 5
17 4002 4001 12 False 5
18 4003 4002 13 False 5
19 4004 4003 14 False 5
For usage see the examples in if __name__ == '__main__'.