-
Notifications
You must be signed in to change notification settings - Fork 9
/
train_lstm_s.py
344 lines (264 loc) · 14.3 KB
/
train_lstm_s.py
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
from argparse import ArgumentParser
import copy
from functools import partial
from itertools import chain
from pathlib import Path
import time
import warnings
import joblib
import numpy as np
import pandas as pd
from sklearn.model_selection import StratifiedKFold, KFold
import torch
from torch import nn
from torch.utils.data import DataLoader
from config.base import (
TOXICITY_COLUMN, IDENTITY_COLUMNS, AUX_TOXICITY_COLUMNS,
EMBEDDING_FASTTEXT, TRAIN_DATA, TEST_DATA, SAMPLE_SUBMISSION)
from src.data import TokenDataset, collate_fn, BucketSampler
from src.metrics import JigsawEvaluator
from src.utils import timer, seed_torch, send_line_notification, load_config
from src.weights import training_weights_s
from src.lstm_models.load_data import load_embedding
from src.lstm_models.optim import ParamScheduler
from src.lstm_models.models import LstmGruModel, LstmCapsuleAttenModel, LstmConvModel
from src.lstm_models.preprocess import preprocess
from src.lstm_models.tokenize import build_vocab, tokenize
from src.lstm_models.utils import EMA, sigmoid, eval_model
def main():
parser = ArgumentParser()
parser.add_argument('--lstm_model', type=str, required=True,
choices=['lstm_gru', 'lstm_capsule_atten', 'lstm_conv'])
parser.add_argument('--valid', action='store_true')
args = parser.parse_args()
config = load_config('./config/lstm_s.json')
config.setdefault('max_len', 220)
config.setdefault('max_features', 100000)
config.setdefault('batch_size', 512)
config.setdefault('train_epochs', 6)
config.setdefault('n_splits', 5)
config.setdefault('start_lr', 1e-4)
config.setdefault('max_lr', 5e-3)
config.setdefault('last_lr', 1e-3)
config.setdefault('warmup', 0.2)
config.setdefault('pseudo_label', True)
config.setdefault('mu', 0.9)
config.setdefault('updates_per_epoch', 10)
config.setdefault('lstm_gru', {})
config.setdefault('lstm_capsule_atten', {})
config.setdefault('lstm_conv', {})
config.setdefault('device', 'cuda')
config.setdefault('seed', 1234)
device = torch.device(config.device)
OUT_DIR = Path(f'../output/{args.lstm_model}/')
MODEL_STATE = OUT_DIR / 'pytorch_model.bin'
submission_file_name = 'valid_submission.csv' if args.valid else 'submission.csv'
SUBMISSION_PATH = OUT_DIR / submission_file_name
OUT_DIR.mkdir(exist_ok=True)
warnings.filterwarnings('ignore')
seed_torch(config.seed)
if args.lstm_model == 'lstm_gru':
neural_net = LstmGruModel
elif args.lstm_model == 'lstm_capsule_atten':
neural_net = LstmCapsuleAttenModel
config.lstm_capsule_atten['max_len'] = config.max_len
else:
neural_net = LstmConvModel
with timer('preprocess'):
train = pd.read_csv(TRAIN_DATA, index_col='id')
if args.valid:
train = train.sample(frac=1, random_state=1029).reset_index(drop=True)
test = train.tail(200000)
train = train.head(len(train) - 200000)
else:
test = pd.read_csv(TEST_DATA)
train['comment_text'] = train['comment_text'].apply(preprocess)
test['comment_text'] = test['comment_text'].apply(preprocess)
# replace blank with nan
train['comment_text'].replace('', np.nan, inplace=True)
test['comment_text'].replace('', np.nan, inplace=True)
# nan prediction
nan_pred = train['target'][train['comment_text'].isna()].mean()
# fill up the missing values
train_x = train['comment_text'].fillna('_##_').values
test_x = test['comment_text'].fillna('_##_').values
# get the target values
weights = training_weights_s(train, TOXICITY_COLUMN, IDENTITY_COLUMNS)
train_y = np.vstack([train[TOXICITY_COLUMN].values, weights]).T
train_y_identity = train[IDENTITY_COLUMNS].values
train_nan_mask = train_x == '_##_'
test_nan_mask = test_x == '_##_'
y_binary = (train_y[:, 0] >= 0.5).astype(int)
y_identity_binary = (train_y_identity >= 0.5).astype(int)
vocab = build_vocab(chain(train_x, test_x), config.max_features)
embedding_matrix = load_embedding(EMBEDDING_FASTTEXT, vocab['token2id'])
joblib.dump(vocab, OUT_DIR / 'vocab.pkl')
np.save('embedding_matrix', embedding_matrix)
train_x = np.array(tokenize(train_x, vocab, config.max_len))
test_x = np.array(tokenize(test_x, vocab, config.max_len))
models = {}
train_preds = np.zeros((len(train_x)))
test_preds = np.zeros((len(test_x)))
ema_train_preds = np.zeros((len(train_x)))
ema_test_preds = np.zeros((len(test_x)))
if config.pseudo_label:
with timer('pseudo label'):
train_dataset = TokenDataset(train_x, targets=train_y, maxlen=config.max_len)
test_dataset = TokenDataset(test_x, maxlen=config.max_len)
train_sampler = BucketSampler(train_dataset, train_dataset.get_keys(),
bucket_size=config.batch_size * 20, batch_size=config.batch_size)
test_sampler = BucketSampler(test_dataset, test_dataset.get_keys(),
batch_size=config.batch_size, shuffle_data=False)
train_loader = DataLoader(train_dataset, batch_size=config.batch_size, shuffle=False,
sampler=train_sampler, num_workers=0, collate_fn=collate_fn)
test_loader = DataLoader(test_dataset, batch_size=config.batch_size, sampler=test_sampler,
shuffle=False, num_workers=0, collate_fn=collate_fn)
model = neural_net(embedding_matrix, **config[args.lstm_model]).to(device)
ema_model = copy.deepcopy(model)
ema_model.eval()
ema_n = int(len(train_loader.dataset) / (config.updates_per_epoch * config.batch_size))
ema = EMA(model, config.mu, n=ema_n)
optimizer = torch.optim.Adam(model.parameters(), lr=0.005)
scheduler = ParamScheduler(optimizer, config.train_epochs * len(train_loader),
start_lr=config.start_lr, max_lr=config.max_lr,
last_lr=config.last_lr, warmup=config.warmup)
all_test_preds = []
for epoch in range(config.train_epochs):
start_time = time.time()
model.train()
for _, x_batch, y_batch in train_loader:
x_batch = x_batch.to(device)
y_batch = y_batch.to(device)
scheduler.batch_step()
y_pred = model(x_batch)
loss = nn.BCEWithLogitsLoss(weight=y_batch[:, 1])(y_pred[:, 0], y_batch[:, 0])
optimizer.zero_grad()
loss.backward()
optimizer.step()
ema.on_batch_end(model)
elapsed_time = time.time() - start_time
print('Epoch {}/{} \t time={:.2f}s'.format(
epoch + 1, config.train_epochs, elapsed_time))
all_test_preds.append(eval_model(model, test_loader))
ema.on_epoch_end(model)
ema.set_weights(ema_model)
ema_model.lstm.flatten_parameters()
ema_model.gru.flatten_parameters()
checkpoint_weights = np.array([2 ** epoch for epoch in range(config.train_epochs)])
checkpoint_weights = checkpoint_weights / checkpoint_weights.sum()
ema_test_y = eval_model(ema_model, test_loader)
test_y = np.average(all_test_preds, weights=checkpoint_weights, axis=0)
test_y = np.mean([test_y, ema_test_y], axis=0)
test_y[test_nan_mask] = nan_pred
weight = np.ones((len(test_y)))
test_y = np.vstack((test_y, weight)).T
models['model'] = model.state_dict()
models['ema_model'] = ema_model.state_dict()
with timer('train'):
splits = list(
StratifiedKFold(n_splits=config.n_splits, shuffle=True, random_state=config.seed).split(train_x, y_binary))
if config.pseudo_label:
splits_test = list(KFold(n_splits=config.n_splits, shuffle=True, random_state=config.seed).split(test_x))
splits = zip(splits, splits_test)
for fold, split in enumerate(splits):
print(f'Fold {fold + 1}')
if config.pseudo_label:
(train_idx, valid_idx), (train_idx_test, _) = split
x_train_fold = np.concatenate((train_x[train_idx], test_x[train_idx_test]), axis=0)
y_train_fold = np.concatenate((train_y[train_idx], test_y[train_idx_test]), axis=0)
else:
train_idx, valid_idx = split
x_train_fold = train_x[train_idx]
y_train_fold = train_y[train_idx]
x_valid_fold = train_x[valid_idx]
y_valid_fold = train_y[valid_idx]
valid_nan_mask = train_nan_mask[valid_idx]
y_valid_fold_binary = y_binary[valid_idx]
y_valid_fold_identity_binary = y_identity_binary[valid_idx]
evaluator = JigsawEvaluator(y_valid_fold_binary, y_valid_fold_identity_binary)
train_dataset = TokenDataset(x_train_fold, targets=y_train_fold, maxlen=config.max_len)
valid_dataset = TokenDataset(x_valid_fold, targets=y_valid_fold, maxlen=config.max_len)
train_sampler = BucketSampler(train_dataset, train_dataset.get_keys(),
bucket_size=config.batch_size * 20, batch_size=config.batch_size)
valid_sampler = BucketSampler(valid_dataset, valid_dataset.get_keys(),
batch_size=config.batch_size, shuffle_data=False)
train_loader = DataLoader(train_dataset, batch_size=config.batch_size, shuffle=False,
sampler=train_sampler, num_workers=0, collate_fn=collate_fn)
valid_loader = DataLoader(valid_dataset, batch_size=config.batch_size, shuffle=False,
sampler=valid_sampler, collate_fn=collate_fn)
model = neural_net(embedding_matrix, **config[args.lstm_model]).to(device)
ema_model = copy.deepcopy(model)
ema_model.eval()
ema_n = int(len(train_loader.dataset) / (config.updates_per_epoch * config.batch_size))
ema = EMA(model, config.mu, n=ema_n)
optimizer = torch.optim.Adam(model.parameters(), lr=0.005)
scheduler = ParamScheduler(optimizer, config.train_epochs * len(train_loader),
start_lr=config.start_lr, max_lr=config.max_lr,
last_lr=config.last_lr, warmup=config.warmup)
all_valid_preds = []
all_test_preds = []
for epoch in range(config.train_epochs):
start_time = time.time()
model.train()
for _, x_batch, y_batch in train_loader:
x_batch = x_batch.to(device)
y_batch = y_batch.to(device)
scheduler.batch_step()
y_pred = model(x_batch)
loss = nn.BCEWithLogitsLoss(weight=y_batch[:, 1])(y_pred[:, 0], y_batch[:, 0])
optimizer.zero_grad()
loss.backward()
optimizer.step()
ema.on_batch_end(model)
valid_preds = eval_model(model, valid_loader)
valid_preds[valid_nan_mask] = nan_pred
all_valid_preds.append(valid_preds)
auc_score, _ = evaluator.get_final_metric(valid_preds)
elapsed_time = time.time() - start_time
print('Epoch {}/{} \t auc={:.5f} \t time={:.2f}s'.format(
epoch + 1, config.train_epochs, auc_score, elapsed_time))
all_test_preds.append(eval_model(model, test_loader))
models[f'model_{fold}{epoch}'] = model.state_dict()
ema.on_epoch_end(model)
ema.set_weights(ema_model)
ema_model.lstm.flatten_parameters()
ema_model.gru.flatten_parameters()
models[f'ema_model_{fold}'] = ema_model.state_dict()
checkpoint_weights = np.array([2 ** epoch for epoch in range(config.train_epochs)])
checkpoint_weights = checkpoint_weights / checkpoint_weights.sum()
valid_preds_fold = np.average(all_valid_preds, weights=checkpoint_weights, axis=0)
valid_preds_fold[valid_nan_mask] = nan_pred
auc_score, _ = evaluator.get_final_metric(valid_preds)
print(f'cv model \t auc={auc_score:.5f}')
ema_valid_preds_fold = eval_model(ema_model, valid_loader)
ema_valid_preds_fold[valid_nan_mask] = nan_pred
auc_score, _ = evaluator.get_final_metric(ema_valid_preds_fold)
print(f'EMA model \t auc={auc_score:.5f}')
train_preds[valid_idx] = valid_preds_fold
ema_train_preds[valid_idx] = ema_valid_preds_fold
test_preds_fold = np.average(all_test_preds, weights=checkpoint_weights, axis=0)
ema_test_preds_fold = eval_model(ema_model, test_loader)
test_preds += test_preds_fold / config.n_splits
ema_test_preds += ema_test_preds_fold / config.n_splits
with timer('evaluate'):
torch.save(models, MODEL_STATE)
test_preds[test_nan_mask] = nan_pred
ema_test_preds[test_nan_mask] = nan_pred
evaluator = JigsawEvaluator(y_binary, y_identity_binary)
auc_score, _ = evaluator.get_final_metric(train_preds)
ema_auc_score, _ = evaluator.get_final_metric(ema_train_preds)
print(f'cv score: {auc_score:<8.5f}')
print(f'EMA cv score: {ema_auc_score:<8.5f}')
train_preds = np.mean([train_preds, ema_train_preds], axis=0)
test_preds = np.mean([test_preds, ema_test_preds], axis=0)
auc_score, _ = evaluator.get_final_metric(train_preds)
print(f'final prediction score: {auc_score:<8.5f}')
if config.pseudo_label:
test_preds = test_preds * 0.9 + test_y[:, 0] * 0.1
submission = pd.DataFrame({
'id': test['id'],
'prediction': test_preds
})
submission.to_csv(SUBMISSION_PATH, index=False)
if __name__ == '__main__':
main()