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A python package for visualization and manipulation of sequences and alignments

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seq_tools

A python package for visualization and manipulation of sequences and alignments

Important note

Currently library needs a system wide installation of Latex with TexShade At some point the texlive-core conda module may replace it.

sudo tlmgr update --self
sudo tlmgr install texshade

##Packages

conda install emboss
conda install blast
conda install pandas biopython
conda install -c r r-ggplot2 r-png

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A python package for visualization and manipulation of sequences and alignments

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  • Python 94.8%
  • Jupyter Notebook 4.9%
  • Makefile 0.3%