'-installed': InstalledToolsGalaxyTestDriver,
'-framework': FrameworkToolsGalaxyTestDriver,
'-data_managers': DataManagersGalaxyTestDriver,
'-selenium': SeleniumGalaxyTestDriver,
}
def find_test_driver():
"""Look at command-line args and find the correct Galaxy test driver."""
test_driver = DefaultGalaxyTestDriver
for key in TEST_DRIVERS.keys():
if _check_arg(key):
test_driver = TEST_DRIVERS[key]
return test_driver
def _check_arg(name):
try:
index = sys.argv.index(name)
del sys.argv[index]
ret_val = True
except ValueError:
ret_val = False
return ret_val
if __name__ == "__main__":
driver_util.drive_test(find_test_driver())
tool_sheds_config_file=galaxy_tool_sheds_conf_file)
kwargs.update(
driver_util.setup_galaxy_config(
galaxy_db_path,
use_test_file_dir=False,
default_install_db_merged=False,
default_tool_data_table_config_path=
default_tool_data_table_config_path,
default_shed_tool_data_table_config=
shed_tool_data_table_conf_file,
enable_tool_shed_check=True,
shed_tool_conf=galaxy_shed_tool_conf_file,
update_integrated_tool_panel=True,
))
print("Galaxy database connection:", kwargs["database_connection"])
# ---- Run galaxy webserver ------------------------------------------------------
galaxyapp = driver_util.build_galaxy_app(kwargs)
galaxy_server_wrapper = driver_util.launch_server(
galaxyapp,
galaxybuildapp.app_factory,
kwargs,
)
log.info("Galaxy tests will be run against %s:%s" %
(galaxy_server_wrapper.host, galaxy_server_wrapper.port))
self.server_wrappers.append(galaxy_server_wrapper)
if __name__ == "__main__":
driver_util.drive_test(ToolShedTestDriver)
'-installed': InstalledToolsGalaxyTestDriver,
'-framework': FrameworkToolsGalaxyTestDriver,
'-data_managers': DataManagersGalaxyTestDriver,
'-selenium': SeleniumGalaxyTestDriver,
}
def find_test_driver():
"""Look at command-line args and find the correct Galaxy test driver."""
test_driver = DefaultGalaxyTestDriver
for key in TEST_DRIVERS.keys():
if _check_arg(key):
test_driver = TEST_DRIVERS[key]
return test_driver
def _check_arg(name):
try:
index = sys.argv.index(name)
del sys.argv[index]
ret_val = True
except ValueError:
ret_val = False
return ret_val
if __name__ == "__main__":
driver_util.drive_test(find_test_driver())
shed_tool_path=galaxy_shed_tool_path,
tool_data_path=tool_data_path,
tool_sheds_config_file=galaxy_tool_sheds_conf_file)
kwargs.update(
driver_util.setup_galaxy_config(
galaxy_db_path,
use_test_file_dir=False,
default_install_db_merged=False,
default_tool_data_table_config_path=default_tool_data_table_config_path,
default_shed_tool_data_table_config=shed_tool_data_table_conf_file,
enable_tool_shed_check=True,
shed_tool_conf=galaxy_shed_tool_conf_file,
update_integrated_tool_panel=True,
)
)
print("Galaxy database connection:", kwargs["database_connection"])
# ---- Run galaxy webserver ------------------------------------------------------
galaxyapp = driver_util.build_galaxy_app(kwargs)
galaxy_server_wrapper = driver_util.launch_server(
galaxyapp,
galaxybuildapp.app_factory,
kwargs,
)
log.info("Galaxy tests will be run against %s:%s" % (galaxy_server_wrapper.host, galaxy_server_wrapper.port))
self.server_wrappers.append(galaxy_server_wrapper)
if __name__ == "__main__":
driver_util.drive_test(ToolShedTestDriver)
