def clone_bundle(path, prefix=None, bundle_name=None):
"""
Clone the bundle (located at `path`) by creating a new environment at
`prefix` (unless prefix is None or the prefix directory already exists)
"""
try:
t = tarfile.open(path, 'r:*')
meta = json.load(t.extractfile('info/index.json'))
except tarfile.ReadError:
raise RuntimeError('bad tar archive: %s' % path)
except KeyError:
raise RuntimeError("no archive 'info/index.json' in: %s" % (path))
if prefix and not isdir(prefix):
for m in t.getmembers():
if m.path.startswith((BDP, 'info/')):
continue
t.extract(m, path=prefix)
dists = discard_conda('-'.join(s.split())
for s in meta.get('depends', []))
actions = plan.ensure_linked_actions(dists, prefix)
index = get_index()
plan.display_actions(actions, index)
plan.execute_actions(actions, index, verbose=True)
bundle_dir = abspath(
expanduser('~/bundles/%s' % (bundle_name or meta.get('bundle_name'))))
for m in t.getmembers():
if m.path.startswith(BDP):
targetpath = join(bundle_dir, m.path[len(BDP):])
t._extract_member(m, targetpath)
t.close()
def clone_bundle(path, prefix=None, bundle_name=None):
"""
Clone the bundle (located at `path`) by creating a new environment at
`prefix` (unless prefix is None or the prefix directory already exists)
"""
try:
t = tarfile.open(path, 'r:*')
meta = json.load(t.extractfile('info/index.json'))
except tarfile.ReadError:
raise RuntimeError('bad tar archive: %s' % path)
except KeyError:
raise RuntimeError("no archive 'info/index.json' in: %s" % (path))
if prefix and not isdir(prefix):
for m in t.getmembers():
if m.path.startswith((BDP, 'info/')):
continue
t.extract(m, path=prefix)
dists = discard_conda('-'.join(s.split())
for s in meta.get('depends', []))
actions = plan.ensure_linked_actions(dists, prefix)
index = get_index()
plan.display_actions(actions, index)
plan.execute_actions(actions, index, verbose=True)
bundle_dir = abspath(expanduser('~/bundles/%s' %
(bundle_name or meta.get('bundle_name'))))
for m in t.getmembers():
if m.path.startswith(BDP):
targetpath = join(bundle_dir, m.path[len(BDP):])
t._extract_member(m, targetpath)
t.close()
def clone_analysispackage(path,
prefix=None,
analysispackage_name=None,
data_path=None):
"""
Clone the analysispackage (located at `path`) by creating a new environment at
`prefix` (unless prefix is None or the prefix directory already exists)
"""
try:
t = tarfile.open(path, 'r:*')
meta = json.load(t.extractfile('info/index.json'))
except tarfile.ReadError:
raise RuntimeError('bad tar archive: %s' % path)
except KeyError:
raise RuntimeError("no archive 'info/index.json' in: %s" % (path))
if prefix and isdir(prefix):
print("erasing old environment at %s" % prefix)
shutil.rmtree(prefix)
if prefix and not isdir(prefix):
for m in t.getmembers():
if m.path.startswith((BDP, 'info/')):
continue
t.extract(m, path=prefix)
dists = discard_conda('-'.join(s.split())
for s in meta.get('depends', []))
actions = plan.ensure_linked_actions(dists, prefix)
index = get_index()
plan.display_actions(actions, index)
plan.execute_actions(actions, index, verbose=False)
if not data_path:
analysispackage_dir = abspath(
expanduser(
'~/analysispackages/%s' %
(analysispackage_name or meta.get('analysispackage_name'))))
else:
analysispackage_dir = data_path
for m in t.getmembers():
if m.path.startswith(BDP):
targetpath = join(analysispackage_dir, m.path[len(BDP):])
t._extract_member(m, targetpath)
with open(join(data_path, ".metadata.json"), "w+") as f:
json.dump({'env': prefix}, f)
t.close()
def clone_analysispackage(path, prefix=None, analysispackage_name=None, data_path=None):
"""
Clone the analysispackage (located at `path`) by creating a new environment at
`prefix` (unless prefix is None or the prefix directory already exists)
"""
try:
t = tarfile.open(path, 'r:*')
meta = json.load(t.extractfile('info/index.json'))
except tarfile.ReadError:
raise RuntimeError('bad tar archive: %s' % path)
except KeyError:
raise RuntimeError("no archive 'info/index.json' in: %s" % (path))
if prefix and isdir(prefix):
print ("erasing old environment at %s" % prefix)
shutil.rmtree(prefix)
if prefix and not isdir(prefix):
for m in t.getmembers():
if m.path.startswith((BDP, 'info/')):
continue
t.extract(m, path=prefix)
dists = discard_conda('-'.join(s.split())
for s in meta.get('depends', []))
actions = plan.ensure_linked_actions(dists, prefix)
index = get_index()
plan.display_actions(actions, index)
plan.execute_actions(actions, index, verbose=False)
if not data_path:
analysispackage_dir = abspath(expanduser('~/analysispackages/%s' %
(analysispackage_name or meta.get('analysispackage_name'))))
else:
analysispackage_dir = data_path
for m in t.getmembers():
if m.path.startswith(BDP):
targetpath = join(analysispackage_dir, m.path[len(BDP):])
t._extract_member(m, targetpath)
with open(join(data_path, ".metadata.json"), "w+") as f:
json.dump({'env' : prefix}, f)
t.close()
