def create_simulation(destDir,
inputPath):
'''
@description
create the executable corresponding to the inputPath, save it
to the destDir, create the PBS script to run the simulation
and save it in the destDir
'''
#0) check that destDir exists
if(not os.path.isdir(destDir)):
print 'library_wall_st_results'
print 'create_simulation'
sys.exit('***directory '+destDir+' does not exist***')
#1) create the executable corresponding to the inputPath
exePath = generate_exe(inputPath)
#2) move the executable to destDir
if(not os.path.isfile(exePath)):
print 'library_wall_st_results'
print 'create_simulation'
sys.exit('***exe file'+exePath+' does not exist***')
newExePath = destDir
newExePath+='/'+os.path.basename(exePath)
shutil.move(exePath,newExePath)
#3) create the PBS script
temperature = float(get_parameter('temperature',inputPath))
micro_contact_angle = float(get_parameter('wall_micro_contact_angle',inputPath))
nameRun = get_name_run(temperature,micro_contact_angle)
simulation_duration = 12.0*60.0*60.0 #estimate_simulation_duration(inputPath)
walltime = estimate_wall_time(simulation_duration,
safety_ratio=6.0)
pbsScriptPath = destDir+'/run_sim.job'
create_pbs_script(
pbsScriptPath,
newExePath,
nameRun=nameRun,
walltime=walltime)
return [pbsScriptPath,nameRun]
def create_simulation(destDir,
inputPath,
PBSnameRun,
adapt_domain=False):
'''
@description
create the executable corresponding to the inputPath, save it
to the destDir, create the PBS script to run the simulation
and save it in the destDir
'''
#0) check that destDir exists
if(not os.path.isdir(destDir)):
print 'library_wall_nonst_results'
print 'create_simulation'
sys.exit('***directory '+destDir+' does not exist***')
#1) create the executable corresponding to the inputPath
exePath = generate_exe(inputPath,bf_layer_option=adapt_domain)
#2) move the executable to destDir
if(not os.path.isfile(exePath)):
print 'library_wall_nonst_results'
print 'create_simulation'
sys.exit('***exe file'+exePath+' does not exist***')
newExePath = destDir
newExePath+='/'+os.path.basename(exePath)
shutil.move(exePath,newExePath)
#3) create the PBS script
simulation_duration = estimate_simulation_duration(inputPath)
walltime = estimate_wall_time(simulation_duration,
safety_ratio=2.0)
pbsScriptPath = destDir+'/run_sim.job'
create_pbs_script(
pbsScriptPath,
newExePath,
nameRun=PBSnameRun,
walltime=walltime)
return [pbsScriptPath,PBSnameRun]
