Ejemplo n.º 1
0
def _format_labels(row):
    """format participant labels"""
    crow = []

    for col_id, prefix in list(BIDS_COMP.items()):
        if pd.notnull(row[[col_id]])[0]:
            crow.append('%s-%s' % (prefix, row[[col_id]].values[0]))
    return '_'.join(crow)
Ejemplo n.º 2
0
    def _gen_outfile(self):
        out_dir = getcwd()
        if isdefined(self.inputs.out_dir):
            out_dir = self.inputs.out_dir

        fname_comps = []
        for comp, cpre in list(BIDS_COMP.items()):
            comp_val = None
            if isdefined(getattr(self.inputs, comp)):
                comp_val = getattr(self.inputs, comp)
                if comp_val == "None":
                    comp_val = None

            comp_fmt = '{}-{}'.format
            if comp_val is not None:
                if isinstance(
                        comp_val,
                    (bytes, str)) and comp_val.startswith(cpre + '-'):
                    comp_val = comp_val.split('-', 1)[-1]
                fname_comps.append(comp_fmt(cpre, comp_val))

        fname_comps.append('%s.json' % self.inputs.modality)
        self._results['out_file'] = op.join(out_dir, '_'.join(fname_comps))
        return self._results['out_file']