def get(self, dataset_id, render_format):
"""
Display dataset record.
"""
# pylint: disable=no-self-use
dataset = Dataset.get(dataset_id)
print(render(dataset, render_format))
if render_format == 'table':
datafiles = DataFile.list(dataset_id)
print(render(datafiles, render_format))
def get(self, experiment_id, render_format):
"""
Display experiment record.
"""
# pylint: disable=no-self-use
experiment = Experiment.get(experiment_id)
print(render(experiment, render_format))
if render_format == 'table':
datasets = Dataset.list(experiment_id=experiment_id)
print(render(datasets, render_format, display_heading=False))
def get(self, facility_id, render_format):
"""
Display facility record.
"""
# pylint: disable=no-self-use
facility = Facility.get(facility_id)
print(render(facility, render_format))
if render_format == 'table':
instruments = Instrument.list(facility_id)
print(render(instruments, render_format))
def get(self, storage_box_id, render_format):
"""
Display storage box record.
"""
# pylint: disable=no-self-use
storage_box = StorageBox.get(storage_box_id)
print(render(storage_box, render_format))
def get(self, instrument_id, render_format):
"""
Display instrument record.
"""
# pylint: disable=no-self-use
instrument = Instrument.get(instrument_id)
print(render(instrument, render_format))
def list(self, render_format):
"""
Display list of API endpoints.
"""
# pylint: disable=no-self-use
api_endpoints = ApiEndpoint.list()
print(render(api_endpoints, render_format))
def get(self, datafile_id, render_format):
"""
Display datafile record.
"""
# pylint: disable=no-self-use
datafile = DataFile.get(datafile_id)
print(render(datafile, render_format))
def list(self, limit, offset, order_by, render_format):
"""
Display list of facility records.
"""
# pylint: disable=no-self-use
facilities = Facility.list(limit, offset, order_by)
print(render(facilities, render_format))
def list(self, limit, offset, order_by, render_format):
"""
Display list of storage boxes.
"""
# pylint: disable=no-self-use
storage_boxes = StorageBox.list(limit, offset, order_by)
print(render(storage_boxes, render_format))
def get(self, model, render_format):
"""
Display schema for a model's API endpoint.
"""
# pylint: disable=no-self-use
api_schema = ApiSchema.get(model)
print(render(api_schema, render_format))
def update(self, dataset_id, description, render_format):
"""
Update dataset record.
"""
# pylint: disable=no-self-use
dataset = Dataset.update(dataset_id, description)
print(render(dataset, render_format))
print("Dataset updated successfully.")
def list(self, filters, limit, offset, order_by, render_format):
"""
Display list of experiment records.
"""
# pylint: disable=no-self-use
# pylint: disable=too-many-arguments
experiments = Experiment.list(filters, limit, offset, order_by)
print(render(experiments, render_format))
def list(self, dataset_id, directory, filename, filters, limit, offset, order_by, render_format):
"""
Display list of datafile records.
"""
# pylint: disable=too-many-arguments
# pylint: disable=no-self-use
datafiles = DataFile.list(dataset_id, directory, filename, filters, limit, offset, order_by)
print(render(datafiles, render_format))
def update(self, datafile_id, md5sum, render_format):
"""
Update datafile record.
"""
# pylint: disable=no-self-use
datafile = DataFile.update(datafile_id, md5sum)
print(render(datafile, render_format))
print("DataFile updated successfully.")
def update(self, instrument_id, name, render_format):
"""
Update instrument record.
"""
# pylint: disable=no-self-use
instrument = Instrument.update(instrument_id, name)
print(render(instrument, render_format))
print("Instrument updated successfully.")
def create(self, facility_id, name, render_format):
"""
Create instrument record.
"""
# pylint: disable=no-self-use
instrument = Instrument.create(facility_id, name)
print(render(instrument, render_format))
print("Instrument created successfully.")
def update(self, experiment_id, title, description, render_format):
"""
Update experiment record.
"""
# pylint: disable=no-self-use
experiment = \
Experiment.update(experiment_id, title, description)
print(render(experiment, render_format))
print("Experiment updated successfully.")
def list(self, facility_id, limit, offset, order_by, render_format):
"""
Display list of instrument records.
"""
# pylint: disable=too-many-arguments
# pylint: disable=no-self-use
instruments = Instrument.list(facility_id,
limit, offset, order_by)
print(render(instruments, render_format))
def create(self, title, description, institution, params, render_format):
"""
Create experiment record.
"""
# pylint: disable=no-self-use
# pylint: disable=too-many-arguments
experiment = Experiment.create(title, description, institution, params)
print(render(experiment, render_format))
print("Experiment created successfully.")
def list(self, experiment_id, filters, limit, offset, order_by,
render_format):
"""
Display list of dataset records.
"""
# pylint: disable=too-many-arguments
# pylint: disable=no-self-use
datasets = Dataset.list(experiment_id, filters,
limit, offset, order_by)
print(render(datasets, render_format))
def create(self, experiment_id, description, instrument_id, params,
render_format):
"""
Create dataset record.
"""
# pylint: disable=too-many-arguments
# pylint: disable=no-self-use
dataset = Dataset.create(experiment_id, description, instrument_id,
params)
print(render(dataset, render_format))
print("Dataset created successfully.")
def create(self, dataset_id, storagebox, dataset_path, path, render_format):
"""
Create datafile record(s) for an existing file or for all files
within a directory.
"""
# pylint: disable=too-many-arguments
# pylint: disable=no-self-use
if os.path.isdir(path):
num_created = DataFile.create_datafiles(dataset_id, storagebox, dataset_path, path)
print("%s datafiles created." % num_created)
else:
datafile = DataFile.create_datafile(dataset_id, storagebox, dataset_path, path)
print(render(datafile, render_format))
print("DataFile created successfully.")