def add_or_update_article(self, **adata):
"creates article+article-version stubs for testing"
replacements = [
('pub-date', 'published'),
('update', 'versionDate'),
]
renkeys(adata, replacements)
struct = {
'id':
utils.doi2msid(adata['doi'])
if 'doi' in adata else adata['manuscript_id'],
'volume':
1,
'type':
'research-article',
'title':
'[default]',
'version':
1,
'status':
models.VOR,
'published':
'2012-01-01T00:00:00Z'
}
struct.update(adata)
delall(struct, ['journal']) # can't be serialized, not utilised anyway
with self.settings(VALIDATE_FAILS_FORCE=False):
# bad ajson won't fail ingest
av = ajson_ingestor.ingest_publish({'article': struct}, force=True)
av.datetime_published = utils.todt(struct['published'])
av.save()
return av
def setUp(self):
ingest_these = [
"elife-01968-v1.xml.json", # => 01749
"elife-16695-v1.xml.json", # => []
#"elife-16695-v2.xml.json",
"elife-20125-v1.xml.json", # poa
#"elife-16695-v3.xml.json"
]
ajson_dir = join(self.fixture_dir, 'ajson')
for ingestable in ingest_these:
path = join(ajson_dir, ingestable)
data = json.load(open(path, 'r'))
# remove these values here so they don't interfere in creation
utils.delall(
data,
['-related-articles-internal', '-related-articles-external'])
ajson_ingestor.ingest_publish(data)
self.msid1 = 1968
self.msid2 = 16695
self.msid3 = 20125
self.av = models.ArticleVersion.objects.get(
article__manuscript_id=self.msid1, version=1)
self.a = models.Article.objects.get(
manuscript_id=self.msid2) # note: no version information
def load_ajson(self, path, strip_relations=True):
"loads an article-json fixture. conveniently strips relations by default"
data = json.load(open(path, 'r'))
if strip_relations:
# remove these values here so they don't interfere in creation
utils.delall(
data['article'],
['-related-articles-internal', '-related-articles-external'])
return data
def test_delall(self):
x = {'a': 1, 'b': 2, 'c': 3}
expected_list = [
(['a', 'b', 'c'], {}),
(['a', 'b'], {'c': 3}),
(['a'], {'b': 2, 'c': 3}),
([], x),
]
for keys, expected in expected_list:
y = copy.deepcopy(x)
utils.delall(y, keys)
self.assertEqual(y, expected)
def setUp(self):
ingest_these = [
#"elife-01968-v1.xml.json",
"elife-20125-v1.xml.json", # poa
"elife-20125-v2.xml.json", # poa
"elife-20125-v3.xml.json", # vor, related to 21162
#"elife-21162-v1.xml.json", # vor, related to 20125
#"elife-16695-v1.xml.json",
#"elife-16695-v2.xml.json",
#"elife-16695-v3.xml.json", # vor
"elife-20105-v1.xml.json", # poa
"elife-20105-v2.xml.json", # poa
"elife-20105-v3.xml.json" # poa, UNPUBLISHED
]
ajson_dir = join(self.fixture_dir, 'ajson')
for ingestable in ingest_these:
data = self.load_ajson(join(ajson_dir, ingestable))
# remove these values here so they don't interfere in creation
utils.delall(
data,
['-related-articles-internal', '-related-articles-external'])
ajson_ingestor.ingest_publish(data)
self.msid1 = 20125
self.msid2 = 20105
# 2 article, 6 versions, 5 published, 1 unpublished
self.unpublish(self.msid2, version=3)
# an unauthenticated client
self.c = Client()
# an authenticated client
self.ac = Client(**{
mware.CGROUPS: 'admin',
})
def load_ajson2(self, path_or_data):
"loads an article-json fixture. conveniently strips relations and other troublesome things"
if isinstance(path_or_data, str):
# assume string is a path to a file
path = path_or_data
data = json.load(open(path, 'r'))
else:
# assume data is article-json
data = path_or_data
# remove the 'journal' and 'snippet' sections if present
if 'article' in data:
data = data['article']
# remove these values here so they don't interfere in creation
utils.delall(data, [
'-related-articles-internal', '-related-articles-external',
'-history'
])
# remove these values here so they don't interfere with comparison
utils.delall(data, ['-meta', 'statusDate', 'versionDate'])
return data
def test_delall_bad_idx(self):
x = {'a': 1, 'b': 2, 'c': 3}
y = copy.deepcopy(x)
utils.delall(x, ['foo', 'bar', 'baz'])
self.assertEqual(x, y)