def plot(p1, p2, name):
gsamps = samples.load('gsa_samples/GSA_Samples.data')
good_samps = [sample for sample in gsamps if sample.pb is not None]
pb_vals = [fix(sample.pb) for sample in good_samps]
cs_vals = [sample.cs for sample in good_samps]
cult_vals = [sample.cultivated for sample in good_samps]
art_vals = [sample.artificial for sample in good_samps]
rain_vals = [sample.rain.mean for sample in good_samps]
relief_vals = [sample.relief.mean for sample in good_samps]
elevation_vals = [sample.elevation.mean for sample in good_samps]
slope_vals = [sample.slope.mean for sample in good_samps]
area_vals = [sample.area/1000000 for sample in good_samps]
pb = (pb_vals, LABELS['pb'], 'pb')
cs = (cs_vals, LABELS['cs'], 'cs')
cult = (cult_vals, LABELS['cult'], 'cult')
art = (art_vals, LABELS['art'], 'art')
rain = (rain_vals, LABELS['rain'], 'rain')
relief = (relief_vals, LABELS['relief'], 'relief')
elevation = (elevation_vals, LABELS['elevation'], 'elev')
slope = (slope_vals, LABELS['slope'], 'slope')
area = (area_vals, LABELS['area'], 'area')
mapper = {
'pb':pb,
'cs':cs,
'cult':cult,
'cultivated':cult,
'cultivation':cult,
'art':art,
'artificial':art,
'rain':rain,
'precip':rain,
'precipitation':rain,
'relief':relief,
'elevation':elevation,
'elev':elevation,
'slope':slope,
'area':area,
}
oname = "gsa_samples/plots/%s" % name
samples.plot(mapper[p1], mapper[p2], oname)
def gogographit(neg='nothing'):
gsamps = samples.load('gsa_samples/GSA_Samples.data')
good_samps = [sample for sample in gsamps if sample.pb is not None]
if neg == 'remove':
good_samps = [sample for sample in good_samps if sample.pb >= 0]
if neg == 'zero':
pb_vals = [fix(sample.pb) for sample in good_samps]
else:
pb_vals = [sample.pb for sample in good_samps]
cs_vals = [sample.cs for sample in good_samps]
cult_vals = [sample.cultivated for sample in good_samps]
art_vals = [sample.artificial for sample in good_samps]
rain_vals = [sample.rain.mean for sample in good_samps]
relief_vals = [sample.relief.mean for sample in good_samps]
elevation_vals = [sample.elevation.mean for sample in good_samps]
slope_vals = [sample.slope.mean for sample in good_samps]
area_vals = [sample.area/1000000 for sample in good_samps]
pb = (pb_vals, LABELS['pb'], 'pb')
cs = (cs_vals, LABELS['cs'], 'cs')
cult = (cult_vals, LABELS['cult'], 'cult')
art = (art_vals, LABELS['art'], 'art')
rain = (rain_vals, LABELS['rain'], 'rain')
relief = (relief_vals, LABELS['relief'], 'relief')
elevation = (elevation_vals, LABELS['elevation'], 'elev')
slope = (slope_vals, LABELS['slope'], 'slope')
area = (area_vals, LABELS['area'], 'area')
indvars = (cult, art, rain, relief, elevation, slope, area)
plot_folder = 'gsa_samples/plots'
if neg == 'zero':
extra = "_zero"
elif neg == 'remove':
extra = "no-neg"
else:
extra = ""
for var in indvars:
print "plotting %s against %s" % (var[2], 'pb')
fname = "%s/%s_pb%s" % (plot_folder, var[2], extra)
samples.plot(var, pb, fname)