def run(self):
if self.time_since_last_tracking is None or time.time() - self.time_since_last_tracking >= FramesFileProcessor.frame_tracking_interval:
logger.info("Starting tracking")
self.track_frames()
logger.info("Finished tracking")
self.time_since_last_tracking = time.time()
stacks = self.get_valid_stacks_from_queue()
logger.debug(f'{len(stacks)} in queue for {self.session.name}')
stacks = self.filter_for_most_recent_stacks(stacks)
if ResourceManager.request_cpus(FramesFileProcessor.required_cpus):
for stack in stacks:
self.queued.remove(stack)
process_thread = Thread(
target=self.process_frames,
args=([stacks])
)
process_thread.start()
def run(self):
if self.time_since_last_tracking is None or time.time(
) - self.time_since_last_tracking >= MontageProcessor.tracking_interval:
self.sync_with_db()
self.time_since_last_tracking = time.time()
if self.queue.empty():
return
if ResourceManager.request_cpus(MontageProcessor.required_cpus):
try:
montage = self.queue.get()
process_thread = Thread(target=self.process_montage,
args=[montage])
process_thread.start()
except Exception as e:
ResourceManager.release_cpus(MontageProcessor.required_cpus)
self.queue.put(montage)
LOG.exception(e)
def run(self):
if self.time_since_last_tracking is None or time.time() - self.time_since_last_tracking >= DogpickerProcessor.tracking_interval:
self.update_tracked_data()
self.time_since_last_tracking = time.time()
if len(self.queued) == 0:
return
if ResourceManager.request_cpus(DogpickerProcessor.required_cpus):
try:
motion_correction_data = self.queued.pop()
acquisition_data = AcquisitionData(motion_correction_data.base_name)
acquisition_data.fetch(self.session.db)
process_thread = Thread(
target=self.process_data,
args=(acquisition_data, motion_correction_data)
)
process_thread.start()
except:
ResourceManager.release_cpus(DogpickerProcessor.required_cpus)