mapmuts is a Python package for analyzing deep-sequencing data to identify mutation frequencies in mutant libraries of a gene. It is specifically designed for the analysis of overlapping paired-end reads.
mapmuts source code is available on GitHub.
mapmuts documentation is available on GitHub Pages.
mapmuts was written by Jesse Bloom.
mapmuts is free software under the GPLv3 license.
If you use mapmuts, then please cite mapmuts as described here.