EcoFOCI timeseries processing tools
python EcoFOCIraw2nc.py -h
`Convert raw data from variety of instruments to netcdf archive format
positional arguments:
DataFile full path to data file
OutDataFile full path to output data file
InstType Instrument Type - run program with -ih flag to get
list
InstDepth Nominal Instrument Depth
optional arguments:
-h, --help show this help message and exit
-ih, --InstTypeHelp Instrument Type - run program with -ih flag to get
list
-dec DECLINATION DECLINATION, --declination DECLINATION DECLINATION
magnetic declination correction [lat.dd lon.dd] +N,+W
-kw KEYWORDARGS [KEYWORDARGS ...], --keywordargs KEYWORDARGS [KEYWORDARGS ...]
instrument dependent kword args - see readme for help
-latlon LATLON [LATLON ...], --latlon LATLON [LATLON ...]
add to output file variables [lat mm.mm lon mm.mm]
+N,+W
-add_meta ADD_META ADD_META ADD_META, --add_meta ADD_META ADD_META ADD_META
MooringID serial_no water_depth`
Instrument Dependent KEYWORDARGS: (replace the variable name after -kw with desired value)
mtr : -kw clock_corr coef1 coef2 coef3 10min_interp (clock_corr - time to add to ecf clock in seconds, 10min_interp - True/False)
prawler : -kw interp_time pressure_grid_interp (eg True True - actual values are hardcoded to hourly and 0.5m grid)
rcm_sg : -kw turbidity pressure (eg true if sensor is attached)
sbe16 : -kw clock_corr time_stamp (time_elapsed_s, time_instrument_s, time_instrument_doy), hourly_interp (True/False)
sbe37/sbe39 : -kw truncate_seconds (true / false - true if truncated and truncates down to nearest minute)
sbe56 : -kw roundTime (true / false - rounds time to nearest minute) filetype (csv / cnv - type of exported file)
ecf : -kw clock_corr ave_scheme scale_factor dark_count hourly_interp (clock_corr - time to add to ecf clock in seconds , ave_scheme - median / mean, cal scale factor, cal dark count , hourly_interp - True/False)
wpak : -kw argos (true/false)
adcp_ice: -kw roundTime (roundTime - True/False rounds to nearest hour)
`
python NetCDF_Time_Tools.py -h
`Interpolate or adjust times
positional arguments:
sourcefile complete path to epic file
operation CF_Convert, RoundUp to nearest hour, RoundDown to
nearest hour, Interpolate to nearest hour
optional arguments:
-h, --help show this help message and exit
CF_Convert optional arguments
--time_since_str TIME_SINCE_STR [TIME_SINCE_STR ...]
cf compliant time since str (eg. "days since
1800-01-01"
-is2D, --is2D convert files like ADCP that have two varying
dimensions
`
################
Legal Disclaimer
This repository is a scientific product and is not official communication of the National Oceanic and Atmospheric Administration (NOAA), or the United States Department of Commerce (DOC). All NOAA GitHub project code is provided on an 'as is' basis and the user assumes responsibility for its use. Any claims against the DOC or DOC bureaus stemming from the use of this GitHub project will be governed by all applicable Federal law. Any reference to specific commercial products, processes, or services by service mark, trademark, manufacturer, or otherwise, does not constitute or imply their endorsement, recommendation, or favoring by the DOC. The DOC seal and logo, or the seal and logo of a DOC bureau, shall not be used in any manner to imply endorsement of any commercial product or activity by the DOC or the United States Government.