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experiments

experiments

 
 

snakefiles

snakefiles

 
 

tests/test_data

tests/test_data

 
 

.gitignore

.gitignore

 
 

README.md

README.md

 
 

anosim_stat.py

anosim_stat.py

 
 

choose_genomes.py

choose_genomes.py

 
 

composition_count.py

composition_count.py

 
 

cutup_true_clustering_translation.py

cutup_true_clustering_translation.py

 
 

fake_coverage.py

fake_coverage.py

 
 

generate_contigs.py

generate_contigs.py

 
 

generate_correct_validation.py

generate_correct_validation.py

 
 

pca_transform.py

pca_transform.py

 
 

requirements.txt

requirements.txt

 
 

validate.py

validate.py

 
 

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Test data

I included the test data from the concoct complete example to test the validate.py script.

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The scripts used in msc_thesis project.

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