RiboPlot includes programs to plot and output Ribo-Seq read counts from an alignment file (BAM format).
There are two programs in the package:
riboplot
Plot and output read counts (csv) for a single transcript.
ribocount
Output read counts for all transcripts in an alignment.
Free software: GPL license.
Documentation: http://pythonhosted.org/riboplot.
PyPI: https://pypi.python.org/pypi/riboplot.
Github Repository: https://github.com/vimalkvn/riboplot.
Online: http://ribogalaxy.ucc.ie (under RiboSeq Analysis/RiboPlot).