• Python 2.7.(Prefered Anaconda Distribution)
• Numpy, Scipy, Pandas and Matplotlib.
• Code is written with to do computations in parallel on a 4 Node Cluster Computing Facility. Running on a normal PC might take more time.

Open terminal in any of the Cluster(e.g. Cluster_0) directory and run.

$ python RunMeClustered.py

This will do the simulation and log the results. In our case it took around ~12 Hours.

$ python ScatterMap.py

|OS Linux|Machine|OptiPlex 7010 (OptiPlex 7010)|64 bits|RAM 8GiB|
CPU : Intel(R) Core(TM) i7-3770 CPU @ 3.40GHz

Python Version and Major Packages:
Python 2.7.13 |Anaconda custom (64-bit)
adaptfilt==0.2, 
cython==0.25.2, 
h5py==2.7.0, 
matplotlib==2.0.2, 
numpy==1.13.1, 
pandas==0.20.1, 
pip==9.0.1,
scipy==0.19.1. 

Sajil C. K.,

Research Scholar,

Dept. of Computational Biology & Bioinformatics,

University of Kerala, Kerala- 695581, India.

Email : sajilckdcb@keralauniversity.ac.in.