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CellProfiler Analyst 2.1.0 (Development)

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Note: This version is heavily under development and not production-ready yet

Authors: Adam Fraser, Thouis R. Jones, David Dao, Jane Hung

Current Developers: David Dao, Jane Hung

Website: cellprofiler.org

Copyright 2015, The Broad Institute of MIT and Harvard.

Distributed under the GPLv2.

About CellProfiler Analyst

Workflow

CellProfiler Analyst allows interactive exploration and analysis of data, particularly from high-throughput, image-based experiments. Included is a supervised machine learning system which can be trained to recognize complicated and subtle phenotypes, for automatic scoring of millions of cells.

Current Development

  • Fixing color issues and bugs due to changes in wxPython Library
  • Restoring visualization functionalities
  • Cleaning up files
  • Improving Evaluation for Classifier
  • Including testing
  • Include documentation

Wiki

http://cellprofiler.org/wiki/index.php

Forum

CellProfiler Analyst development is discussed on the CellProfiler Forum list.

http://forum.cellprofiler.org/

How to file new issues

Please attach sufficient information to reproduce the bug. For many bugs, it is appropriate to attach a properties file, a training set, or a screenshot.

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Software for exploring and analyzing large, high-dimensional image-derived data.

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  • Python 98.5%
  • Other 1.5%