BIDS-compatible intra-subject registration (slice-timing correction, motion correction, coregistration) in pure Python (no FSL, SPM, etc.)!
It also generates HTML pages for QA
This is not yet quite ready for production
All material is Free Software: BSD license (3 clause).
- Official source code repo: https://github.com/dohmatob/pyaffineprep
- Python >= 2.6
- Numpy >= 1.3
- SciPy >= 0.7
- matplotlib >= 0.99.1
- nibabel >= 1.3.0
- nilearn >= 0.1.3
- pybids >= 0.3
$ python setup.py install
$ python pyaffineprep.py -h