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Goal: make classes in python that can be used for the tree modeling Parent class is tree Then children are full tree or map tree or ctw tree In this folder: contexttree : the class constructtree : parser for calling from terminal to construct tree models from fasta files and store them comparetrees : parser for calling from terminal to load the constructed tree models and compare them based on divergence Documentation: Git manual : https://git-scm.com/docs F. M. J. Willems, Y. M. Shtarkov, and T. J. Tjalkens, “Reflections on ‘The Context-Tree Weighting Method: Basic Properties,’” IEEE Trans. Inf. Theory, vol. 41, no. 3, pp. 653–664, 1997.
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