GitHub - mdsmith/CodonAligner-Validation: For testing and quantifying the advantages of a codon aligner in 454 sequences.

Branches Tags

Name		Name	Last commit message	Last commit date
Latest commit History 1 Commits
README		README
alignerTester.py		alignerTester.py
bbinom.py		bbinom.py
codonaligner.bf		codonaligner.bf
genTest.py		genTest.py
homPolDist.py		homPolDist.py
hompol.py		hompol.py
randseqs.py		randseqs.py

Repository files navigation

Run: 

    python3.2 alignerTester.py <inputSequence.fasta> <target gene length> \
        <target number of reads> 

This probably wont work until we've setup generalized binary calling within
the program, allowed for the location/name of these binaries to be passed as
arguments, or set this validation thing up as a proper pipeline.