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viewdata_v2p0.py
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viewdata_v2p0.py
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#!/usr/bin/python
#view data version 2.0
import wx
from configobj import ConfigObj
import matplotlib
matplotlib.use('WXAgg')
from matplotlib.figure import Figure
from matplotlib.backends.backend_wxagg import FigureCanvasWxAgg as FigCanvas
from matplotlib.backends.backend_wx import NavigationToolbar2Wx
import numpy
from scipy import stats
import copy
import qrange
from fitlibrary import *
import statdat
latest_data_sets_dir = './latest_data_sets.INI'
data_dir = '/home/xinxing/Programs/data'
setting_dir = './setting.INI'
class MainWindow(wx.Frame):
def __init__(self, parent, title):
wx.Frame.__init__(self, parent, title=title, size = (1300, 600))
self.saved_settings = ConfigObj(setting_dir)
data_dir = self.saved_settings['DIR']['data_dir']
# del self.saved_settings['DIR']
self.mainpanel = wx.Panel(self, size =(1300, 600))
self.plotpanel = PlotPanel(self.mainpanel)
# self.plotpanel.SetBackgroundColour('blue')
self.controlpanel = ControlPanel(self.mainpanel)
self.controlpanel.SetBackgroundColour('grey')
self.replot = wx.Button(self.mainpanel, label = 'replot')
self.Bind(wx.EVT_BUTTON, self.evt_press_replot, self.replot)
self.vSizer = wx.BoxSizer(wx.VERTICAL)
self.vSizer.Add(self.replot, 0, wx.EXPAND | wx.ALL, 5)
self.vSizer.Add(self.controlpanel, 1, wx.EXPAND | wx.ALL, 5)
mainSizer = wx.BoxSizer(wx.HORIZONTAL)
mainSizer.Add(self.plotpanel, 1, wx.EXPAND | wx.ALL, 5)
mainSizer.Add(self.vSizer, 0, wx.EXPAND | wx.ALL, 5)
self.mainpanel.SetSizerAndFit(mainSizer)
menuBar = wx.MenuBar()
filemenu = wx.Menu()
load_setting = filemenu.Append(wx.ID_OPEN, "&Load setting", "Load previous setting")
self.Bind(wx.EVT_MENU, self.on_load, load_setting)
save_setting = filemenu.Append(wx.ID_SAVE, "&Save setting", "Save currnet setting as new")
self.Bind(wx.EVT_MENU, self.on_save, save_setting)
save_setting_as = filemenu.Append(wx.ID_SAVEAS, "&Override setting as", "Save currnet setting as")
self.Bind(wx.EVT_MENU, self.on_save_as, save_setting_as)
save_data_as = filemenu.Append(wx.NewId(), "&Save data setup as", "Save currnet data setup as")
self.Bind(wx.EVT_MENU, self.on_save_data_as, save_data_as)
delete_data = filemenu.Append(wx.NewId(), "&Delete data setup", "Delete data setup")
self.Bind(wx.EVT_MENU, self.on_delete_data_setup, delete_data)
filemenu.AppendSeparator()
exit = filemenu.Append(wx.ID_EXIT, "&Exit", "Terminate the program")
self.Bind(wx.EVT_MENU, self.on_exit, exit)
menuBar.Append(filemenu, "&File")
set_menu = wx.Menu()
set_data_dir = set_menu.Append(wx.NewId(), "Data folder", "Set data folder")
self.Bind(wx.EVT_MENU, self.on_data_dir, set_data_dir)
menuBar.Append(set_menu, "&Set")
help_menu = wx.Menu()
about = help_menu.Append(wx.ID_ABOUT, "About", "About")
self. Bind(wx.EVT_MENU, self.on_about, about)
menuBar.Append(help_menu, "Help")
self.SetMenuBar(menuBar)
self.Center()
self.Show(True)
def on_load(self, event):
choice = self.saved_settings.keys()
choice.remove('DIR')
dlg = wx.SingleChoiceDialog(self, 'Choose setting to load:','Load setting', choice, wx.CHOICEDLG_STYLE)
if dlg.ShowModal() == wx.ID_OK:
setting_name = dlg.GetStringSelection()
setting = self.saved_settings[setting_name]
self.controlpanel.data_sets_list = [[[] for i in xrange(self.controlpanel.max_row_num)] for j in xrange(self.controlpanel.max_column_num)]
for i in xrange(self.controlpanel.max_row_num):
for j in xrange(self.controlpanel.max_column_num):
set_up_list = setting['subplot('+str(i+1)+','+str(j+1)+')']
for data_set_name in set_up_list:
if self.controlpanel.latest_data_sets.has_key(data_set_name):
new_data_setup = data_setup(data_set_name, self.controlpanel.latest_data_sets.get(data_set_name))
self.controlpanel.data_sets_list[i][j].append(new_data_setup)
self.controlpanel.plot_row_num.SetSelection(int(setting['row_num']) - 1)
self.controlpanel.evt_select_row_num(wx.EVT_CHOICE)
self.controlpanel.plot_column_num.SetSelection(int(setting['column_num']) - 1)
self.controlpanel.evt_select_column_num(wx.EVT_CHOICE)
dlg.Destroy()
def on_save(self, event):
dlg = wx.TextEntryDialog(self, 'Enter a new name for current setting','Save current setting as new')
if dlg.ShowModal() == wx.ID_OK:
setting_name = dlg.GetValue()
setting = self.get_setting(setting_name)
self.saved_settings.update(setting)
self.saved_settings.write()
dlg.Destroy()
def on_save_as(self, event):
choice = self.saved_settings.keys()
choice.remove('DIR')
dlg = wx.SingleChoiceDialog(self, 'Choose to overide an old setting:','Save current setting to old', choice, wx.CHOICEDLG_STYLE)
if dlg.ShowModal() == wx.ID_OK:
setting_name = dlg.GetStringSelection()
setting = self.get_setting(setting_name)
self.saved_settings.update(setting)
self.saved_settings.write()
dlg.Destroy()
def get_setting(self, setting_name):
section_name = setting_name
section = {}
section.update({'row_num': self.controlpanel.row_num})
section.update({'column_num': self.controlpanel.column_num})
data_sets_list = self.controlpanel.data_sets_list
for i,data_sets_i in enumerate(data_sets_list):
for j,data_sets_j in enumerate(data_sets_i):
data_sets_name_list = []
if len(data_sets_j)>0:
for data_set in data_sets_j:
data_sets_name_list.append(data_set.name)
section.update({'subplot('+str(i+1)+','+str(j+1)+')': data_sets_name_list})
return {section_name:section}
def on_save_data_as(self, event):
if (self.controlpanel.current_subplot >= 0) & (self.controlpanel.current_data_set >= 0):
dlg = wx.TextEntryDialog(self, 'Enter a new name for current data set','Save current data set as new')
if dlg.ShowModal() == wx.ID_OK:
self.controlpanel.data_sets_list[self.controlpanel.current_row][self.controlpanel.current_column][self.controlpanel.current_data_set].name = dlg.GetValue()
self.controlpanel.evt_press_save_data_setup(wx.EVT_BUTTON)
self.controlpanel.update_data_sets()
self.controlpanel.latest_data_sets.reload()
dlg.Destroy()
def on_delete_data_setup(self, event):
choice = self.controlpanel.latest_data_sets.keys()
dlg = wx.SingleChoiceDialog(self, 'Choose data setup:','Delete data setup', choice, wx.CHOICEDLG_STYLE)
if dlg.ShowModal() == wx.ID_OK:
setup_name = dlg.GetStringSelection()
del self.controlpanel.latest_data_sets[setup_name]
self.controlpanel.latest_data_sets.write()
dlg.Destroy()
def on_exit(self, event):
self.Destroy()
def on_data_dir(self, event):
dlg = wx.DirDialog(self, "Choose a directory for data:", style = wx.DD_DEFAULT_STYLE | wx.DD_NEW_DIR_BUTTON)
if dlg.ShowModal() == wx.ID_OK:
global data_dir
data_dir = dlg.GetPath()
self.saved_settings['DIR']['data_dir'] = data_dir
self.saved_settings.write()
dlg.Destroy()
def on_about(self, event):
dlg = wx.MessageDialog(self, 'View Data 2.0', style = wx.OK)
dlg.ShowModal()
dlg.Destroy()
def evt_press_replot(self, event):
row_num = self.controlpanel.row_num
column_num = self.controlpanel.column_num
data_sets_list = self.controlpanel.data_sets_list
# self.plotpanel.add_subplot()
k = 0
self.plotpanel.axes = []
self.plotpanel.fig.clf()
for i in xrange(row_num):
for j in xrange(column_num):
if len(data_sets_list[i][j]) > 0:
axes = self.plotpanel.fig.add_subplot(row_num, column_num, k+1)
self.plotpanel.axes.append(axes)
legend_tuple = ()
for l, data_set in enumerate(data_sets_list[i][j]):
data_set.get_data()
if len(data_set.data) > 0:
color = data_set.setup_dict['color'] if data_set.setup_dict['color'] != '' else 'black'
ec = data_set.setup_dict['ec'] if (data_set.setup_dict['ec'] != '')&(data_set.setup_dict['matchB'] == 'False') else color
fmt = data_set.setup_dict['fmt'] if data_set.setup_dict['fmt'] != '' else 'o'
ms = float(data_set.setup_dict['ms']) if data_set.setup_dict['ms'] != '' else 6.0
mew = float(data_set.setup_dict['mew']) if data_set.setup_dict['mew'] != '' else 1.0
Legend = data_set.setup_dict['Legend'] if data_set.setup_dict['Legend'] != '' else 'NoLegend'
stats = (data_set.setup_dict['statsB'] == 'True') if data_set.setup_dict.has_key('statsB') else False
if data_set.sdata != None and stats:
sdata = data_set.sdata
sdata = sdata[sdata[:,0].argsort()]
axes.plot(sdata[:,0], sdata[:,1], '-', color = color)
axes.fill_between(sdata[:,0], sdata[:,1] + sdata[:,2], sdata[:,1] - sdata[:,2], facecolor = color, alpha = 0.3)
axes.fill_between(sdata[:,0], sdata[:,1] +sdata[:,3], sdata[:,1] -sdata[:,3], facecolor = color, alpha = 0.3)
axes.fill_between(sdata[:,0], sdata[:,1] +sdata[:,4]/2., sdata[:,1]-sdata[:,4]/2., facecolor = color, alpha = 0.1)
else:
axes.plot(data_set.data[:,0], data_set.data[:,1], fmt, mec = ec, mfc = color, ms = ms, mew =mew )
legend_tuple = legend_tuple + (Legend,)
if data_set.setup_dict['plotB'] == 'True':
if data_set.setup_dict['fitB'] == 'True':
data_set.get_fit()
axes.plot(data_set.fitX, data_set.fitY)
self.controlpanel.fit.fit_result.ChangeValue(data_set.setup_dict['fit_result'])
legend_tuple = legend_tuple + (Legend+'_fit',)
else:
data_set.get_plot()
axes.plot(data_set.plotX, data_set.plotY)
legend_tuple = legend_tuple + (Legend+'_plot',)
if l == 0:
Xl = data_set.setup_dict['Xl'] if data_set.setup_dict['Xl'] != '' else data_set.setup_dict['X']
Yl = data_set.setup_dict['Yl'] if data_set.setup_dict['Yl'] != '' else data_set.setup_dict['Y']
grid = (data_set.setup_dict['gridB'] == 'True') if data_set.setup_dict.has_key('gridB') else False
Xmin = float(data_set.setup_dict['Xmin']) if data_set.setup_dict['Xmin'] != '' else 'nan'
Ymin = float(data_set.setup_dict['Ymin']) if data_set.setup_dict['Ymin'] != '' else 'nan'
Xmax = float(data_set.setup_dict['Xmax']) if data_set.setup_dict['Xmax'] != '' else 'nan'
Ymax = float(data_set.setup_dict['Ymax']) if data_set.setup_dict['Ymax'] != '' else 'nan'
logx = (data_set.setup_dict['logxB'] == 'True') if data_set.setup_dict.has_key('logxB') else False
logy = (data_set.setup_dict['logyB'] == 'True') if data_set.setup_dict.has_key('logyB') else False
xticks = (data_set.setup_dict['xticksB'] == 'True') if data_set.setup_dict.has_key('xticksB') else True
yticks = (data_set.setup_dict['yticksB'] == 'True') if data_set.setup_dict.has_key('yticksB') else True
axes.set_xlabel(Xl)
axes.set_ylabel(Yl)
axes.grid(grid)
if xticks == False:
axes.set_xticks([])
if yticks == False:
axes.set_yticks([])
if logx:
axes.set_xscale('log')
if logy:
axes.set_yscale('log')
if (Xmin != 'nan') & (Xmax != 'nan'):
axes.set_xlim(Xmin, Xmax)
if (Ymin != 'nan') & (Ymax != 'nan'):
axes.set_ylim(Ymin, Ymax)
if legend_tuple != ():
axes.legend(legend_tuple)
k = k+1
self.plotpanel.canvas.draw()
self.controlpanel.update_raw_data()
class PlotPanel(wx.Panel):
def __init__(self, parent):
wx.Panel.__init__(self, parent)
self.dpi = 100
self.fig = Figure((1.0, 1.0), dpi = self.dpi)
self.canvas = FigCanvas(self, -1, self.fig)
toolbar = NavigationToolbar2Wx( self.canvas )
# self.axes = self.fig.add_subplot(2,1,1)
# self.axes = self.fig.add_subplot(2,1,2)
self.vbox = wx.BoxSizer(wx.VERTICAL)
self.vbox.Add(self.canvas, 1, wx.EXPAND | wx.ALL) #wx.LEFT | wx.TOP | wx.BOTTOM | wx.GROW
self.vbox.Add(toolbar, 0, wx.EXPAND)
self.SetSizerAndFit(self.vbox)
# self.hbox.Fit(self)
# self.axes = self.fig.add_subplot(2,1,2)
def add_subplot(self):
self.axes = self.fig.add_subplot(2,1,2)
self.canvas.draw()
class ControlPanel(wx.Panel):
''' class of ControlPanel, containing all the controls for the plot'''
def __init__(self, parent):
wx.Panel.__init__(self, parent, size = (200,400))
#save setting button
self.save_data_setup = wx.Button(self, label = "save data setup")
self.Bind(wx.EVT_BUTTON, self.evt_press_save_data_setup, self.save_data_setup)
#number of rows/columns of subplots
self.row_num = 1
self.column_num = 1
self.max_row_num = 4
self.max_column_num = 4
self.current_subplot = 0
self.current_data_set = -1
self.update_current_subplot_row_column()
self.data_sets_list = [[[] for i in xrange(self.max_row_num)] for j in xrange(self.max_column_num)]
self.latest_data_sets = ConfigObj(latest_data_sets_dir)
# self.data_sets_names = self.latest_data_sets.keys()
self.tex_row_num = wx.StaticText(self, label = "rows:")
self.plot_row_num = wx.Choice(self, choices = [str(i+1) for i in xrange(self.max_row_num)])
self.Bind(wx.EVT_CHOICE, self.evt_select_row_num, self.plot_row_num)
self.tex_column_num = wx.StaticText(self, label = "cols:")
self.plot_column_num = wx.Choice(self, choices = [str(j+1) for j in xrange(self.max_row_num)])
self.Bind(wx.EVT_CHOICE, self.evt_select_column_num, self.plot_column_num)
#current subplot
self.subplot_list = self.get_subplot_list()
self.plot_cur = wx.ListBox(self, size = (60,100), choices = self.subplot_list, style = wx.LB_SINGLE)
self.Bind(wx.EVT_LISTBOX,self.evt_select_subplot, self.plot_cur)
#add/duplicate/delete data to subplot
self.add = wx.Button(self, label = 'Add')
self.Bind(wx.EVT_BUTTON, self.evt_press_add, self.add)
# self.duplicate = wx.Button(self, label = 'Duplicate')
# self.Bind(wx.EVT_BUTTON, self.evt_press_duplicate, self.duplicate)
self.delete = wx.Button(self, label = 'Del')
self.Bind(wx.EVT_BUTTON, self.evt_press_delete, self.delete)
#data sets of current subplot
self.data_sets = wx.ListBox(self, size = (250,40), style = wx.LB_SINGLE)
self.Bind(wx.EVT_LISTBOX, self.evt_select_data_sets, self.data_sets)
#setup of one data set
self.nb = wx.Notebook(self, size = (450,300))
self.data_setup = DataSetup(self.nb)
self.fit = Fit(self.nb)
self.raw_data = RawData(self.nb)
self.nb.AddPage(self.data_setup,"Setup")
self.nb.AddPage(self.fit,"Fit")
self.nb.AddPage(self.raw_data, "Raw Data")
self.Bind(wx.EVT_TEXT, self.evt_date_change, self.data_setup.date)
self.Bind(wx.EVT_TEXT, self.evt_shots_change, self.data_setup.shots)
self.Bind(wx.EVT_TEXT, self.evt_X_change, self.data_setup.X)
self.Bind(wx.EVT_TEXT, self.evt_Y_change, self.data_setup.Y)
self.Bind(wx.EVT_TEXT, self.evt_Xl_change, self.data_setup.Xl)
self.Bind(wx.EVT_TEXT, self.evt_Xmin_change, self.data_setup.Xmin)
self.Bind(wx.EVT_TEXT, self.evt_Xmax_change, self.data_setup.Xmax)
self.Bind(wx.EVT_TEXT, self.evt_Yl_change, self.data_setup.Yl)
self.Bind(wx.EVT_TEXT, self.evt_Ymin_change, self.data_setup.Ymin)
self.Bind(wx.EVT_TEXT, self.evt_Ymax_change, self.data_setup.Ymax)
self.Bind(wx.EVT_TEXT, self.evt_Legend_change, self.data_setup.Legend)
self.Bind(wx.EVT_TEXT, self.evt_color_change, self.data_setup.color)
self.Bind(wx.EVT_TEXT, self.evt_ec_change, self.data_setup.ec)
self.Bind(wx.EVT_CHECKBOX, self.evt_matchB_change, self.data_setup.matchB)
self.Bind(wx.EVT_TEXT, self.evt_fmt_change, self.data_setup.fmt)
self.Bind(wx.EVT_TEXT, self.evt_ms_change, self.data_setup.ms)
self.Bind(wx.EVT_TEXT, self.evt_mew_change, self.data_setup.mew)
# self.Bind(wx.EVT_CHECKBOX, self.evt_x2B_change, self.data_setup.x2B)
# self.Bind(wx.EVT_CHECKBOX, self.evt_y2B_change, self.data_setup.y2B)
self.Bind(wx.EVT_CHECKBOX, self.evt_statsB_change, self.data_setup.statsB)
self.Bind(wx.EVT_CHECKBOX, self.evt_gridB_change, self.data_setup.gridB)
self.Bind(wx.EVT_CHECKBOX, self.evt_logxB_change, self.data_setup.logxB)
self.Bind(wx.EVT_CHECKBOX, self.evt_logyB_change, self.data_setup.logyB)
self.Bind(wx.EVT_CHECKBOX, self.evt_xticksB_change, self.data_setup.xticksB)
self.Bind(wx.EVT_CHECKBOX, self.evt_yticksB_change, self.data_setup.yticksB)
self.Bind(wx.EVT_CHECKBOX, self.evt_plotB_change, self.fit.plotB)
self.Bind(wx.EVT_CHECKBOX, self.evt_fitB_change, self.fit.fitB)
self.Bind(wx.EVT_CHOICE, self.evt_func_change, self.fit.func)
self.Bind(wx.EVT_TEXT, self.evt_para_list_0_change, self.fit.para_list[0])
self.Bind(wx.EVT_TEXT, self.evt_para_list_1_change, self.fit.para_list[1])
self.Bind(wx.EVT_TEXT, self.evt_para_list_2_change, self.fit.para_list[2])
self.Bind(wx.EVT_TEXT, self.evt_para_list_3_change, self.fit.para_list[3])
self.Bind(wx.EVT_TEXT, self.evt_para_list_4_change, self.fit.para_list[4])
self.Bind(wx.EVT_TEXT, self.evt_para_list_5_change, self.fit.para_list[5])
#Layout of the control panel
hSizer1 = wx.BoxSizer(wx.HORIZONTAL)
hSizer1.Add(self.tex_row_num, 0, wx.ALIGN_CENTER, 0)
hSizer1.Add(self.plot_row_num, 0, wx.ALIGN_CENTER, 0)
hSizer1.Add(self.tex_column_num, 0, wx.ALIGN_CENTER, 0)
hSizer1.Add(self.plot_column_num, 0 , wx.ALIGN_CENTER, 0)
hSizer1.AddSpacer(30)
hSizer1.AddSpacer(30)
hSizer1.AddSpacer(30)
hSizer1.AddSpacer(30)
hSizer1.AddSpacer(30)
hSizer1.AddSpacer(30)
hSizer1.Add(self.save_data_setup, 0, wx.ALL, 0)
vSizer22 = wx.BoxSizer(wx.VERTICAL)
vSizer22.Add(self.add, 1, wx.ALL, 5)
# vSizer22.Add(self.duplicate, 1, wx.ALL, 5)
vSizer22.Add(self.delete, 1, wx.ALL, 5)
hSizer2 = wx.BoxSizer(wx.HORIZONTAL)
hSizer2.Add(self.plot_cur, 0, wx.ALL, 5)
hSizer2.Add(vSizer22, 0, wx.ALL, 5)
hSizer2.Add(self.data_sets, 1, wx.EXPAND|wx.ALL, 5)
mainSizer = wx.BoxSizer(wx.VERTICAL)
mainSizer.Add(hSizer1, 0, wx.ALL, 5)
mainSizer.Add(hSizer2, 0, wx.ALL, 5)
mainSizer.Add(self.nb, 1, wx.ALL, 5)
self.SetSizerAndFit(mainSizer)
# def update_data_sets_list(self):
# self.data_sets_list = [[] for i in xrange(self.row_num * self.column_num)]
def evt_press_save_data_setup(self, event):
# self.latest_data_sets.get(new_data_set_name)
if (self.current_subplot >= 0) & (self.current_data_set >= 0):
data_set = self.data_sets_list[self.current_row][self.current_column][self.current_data_set]
current_data_set_name = data_set.name
self.latest_data_sets[current_data_set_name] = data_set.setup_dict
# print type(self.latest_data_sets)
self.latest_data_sets.write()
def evt_select_row_num(self, event):
self.row_num = self.plot_row_num.GetCurrentSelection() + 1
self.update_plot_cur()
def evt_select_column_num(self, event):
self.column_num = self.plot_column_num.GetCurrentSelection() + 1
self.update_plot_cur()
def update_plot_cur(self):
choices = self.get_subplot_list()
self.current_subplot = 0
self.update_current_subplot_row_column()
self.plot_cur.DeselectAll()
self.plot_cur.Clear()
self.plot_cur.AppendItems(choices)
self.plot_cur.SetSelection(0)
self.evt_select_subplot(wx.EVT_LISTBOX)
def get_subplot_list(self):
'''get subplot ids from the number of rows/columns'''
choices = []
for i in range(self.row_num):
for j in range(self.column_num):
choices = choices + ['(' + str(i+1) + ',' + str(j+1) + ')']
return choices
def evt_select_subplot(self, event):
self.current_subplot = self.plot_cur.GetSelections()[0]
self.update_current_subplot_row_column()
self.flag_add_pressed = False
self.update_data_sets()
def update_current_subplot_row_column(self):
if self.current_subplot >= 0:
self.current_row = self.current_subplot/self.column_num
self.current_column = self.current_subplot%self.column_num
else:
self.current_row = 0
self.current_column = 0
def evt_press_add(self, event):
dlg = wx.SingleChoiceDialog(self, 'Add one data set:', 'Choose Data Set', self.latest_data_sets.keys(), wx.CHOICEDLG_STYLE)
if dlg.ShowModal() == wx.ID_OK:
new_data_set_name = dlg.GetStringSelection()
new_data_setup = data_setup(new_data_set_name, self.latest_data_sets.get(new_data_set_name))
self.data_sets_list[self.current_row][self.current_column].append(new_data_setup)
self.flag_add_pressed = True
self.update_data_sets()
dlg.Destroy()
def update_data_sets(self):
self.data_sets.DeselectAll()
self.data_sets.Clear()
self.current_data_set = -1
if len(self.data_sets_list[self.current_row][self.current_column]) > 0:
for i, data_setup_instant in enumerate(self.data_sets_list[self.current_row][self.current_column]):
data_set_name = str(i+1) +'.' +data_setup_instant.name
self.data_sets.Append(data_set_name)
if self.flag_add_pressed:
self.current_data_set = len(self.data_sets_list[self.current_row][self.current_column]) - 1
self.data_sets.SetSelection(self.current_data_set)
else:
self.current_data_set = 0
self.data_sets.SetSelection(0)
self.evt_select_data_sets(wx.EVT_LISTBOX)
else:
self.update_setup()
def evt_select_data_sets(self, event):
# self.update_data_sets_list()
self.current_data_set = self.data_sets.GetSelections()[0]
self.update_setup()
# def evt_press_duplicate(self, event):
# print 'duplicating'
def evt_press_delete(self, event):
if self.current_data_set >= 0:
self.data_sets_list[self.current_row][self.current_column].pop(self.current_data_set)
self.current_data_set = -1
self.update_data_sets()
def update_raw_data(self):
if self.data_sets_list[self.current_row][self.current_column] == []:
raw_data = ''
else:
raw_data = self.data_sets_list[self.current_row][self.current_column][self.current_data_set].raw_data
self.raw_data.text.ChangeValue(raw_data)
def update_setup(self):
if self.data_sets_list[self.current_row][self.current_column] == []:
setup_dict = {}
else:
setup_dict = self.data_sets_list[self.current_row][self.current_column][self.current_data_set].setup_dict
if setup_dict.has_key('date'):
self.data_setup.date.ChangeValue(setup_dict['date'])
else:
self.data_setup.date.ChangeValue('')
if setup_dict.has_key('shots'):
shots = setup_dict['shots']
if type(shots) == type([]):
shots = ", ".join(shots)
shots.replace(" ", "")
self.data_setup.shots.ChangeValue(shots)
else:
self.data_setup.shots.ChangeValue('')
if setup_dict.has_key('X'):
self.data_setup.X.ChangeValue(setup_dict['X'])
else:
self.data_setup.X.ChangeValue('')
if setup_dict.has_key('Y'):
self.data_setup.Y.ChangeValue(setup_dict['Y'])
else:
self.data_setup.Y.ChangeValue('')
if setup_dict.has_key('Xl'):
self.data_setup.Xl.ChangeValue(setup_dict['Xl'])
else:
self.data_setup.Xl.ChangeValue('')
if setup_dict.has_key('Xmin'):
self.data_setup.Xmin.ChangeValue(setup_dict['Xmin'])
else:
self.data_setup.Xmin.ChangeValue('')
if setup_dict.has_key('Xmax'):
self.data_setup.Xmax.ChangeValue(setup_dict['Xmax'])
else:
self.data_setup.Xmax.ChangeValue('')
if setup_dict.has_key('Yl'):
self.data_setup.Yl.ChangeValue(setup_dict['Yl'])
else:
self.data_setup.Yl.ChangeValue('')
if setup_dict.has_key('Ymin'):
self.data_setup.Ymin.ChangeValue(setup_dict['Ymin'])
else:
self.data_setup.Ymin.ChangeValue('')
if setup_dict.has_key('Ymax'):
self.data_setup.Ymax.ChangeValue(setup_dict['Ymax'])
else:
self.data_setup.Ymax.ChangeValue('')
if setup_dict.has_key('Legend'):
self.data_setup.Legend.ChangeValue(setup_dict['Legend'])
else:
self.data_setup.Legend.ChangeValue('')
if setup_dict.has_key('color'):
self.data_setup.color.ChangeValue(setup_dict['color'])
else:
self.data_setup.color.ChangeValue('')
if setup_dict.has_key('ec'):
self.data_setup.ec.ChangeValue(setup_dict['ec'])
else:
self.data_setup.ec.ChangeValue('')
if setup_dict.has_key('fmt'):
self.data_setup.fmt.ChangeValue(setup_dict['fmt'])
else:
self.data_setup.fmt.ChangeValue('')
if setup_dict.has_key('ms'):
self.data_setup.ms.ChangeValue(setup_dict['ms'])
else:
self.data_setup.ms.ChangeValue('')
if setup_dict.has_key('mew'):
self.data_setup.mew.ChangeValue(setup_dict['mew'])
else:
self.data_setup.mew.ChangeValue('')
if setup_dict.has_key('matchB'):
self.data_setup.matchB.SetValue(setup_dict['matchB'] == 'True' )
else:
self.data_setup.matchB.SetValue(True)
# if setup_dict.has_key('x2B'):
# self.data_setup.x2B.SetValue(setup_dict['x2B'])
# else:
# self.data_setup.x2B.SetValue(False)
#
# if setup_dict.has_key('y2B'):
# self.data_setup.y2B.SetValue(setup_dict['y2B'])
# else:
# self.data_setup.y2B.SetValue(False)
if setup_dict.has_key('statsB'):
self.data_setup.statsB.SetValue(setup_dict['statsB'] == 'True')
else:
self.data_setup.statsB.SetValue(False)
if setup_dict.has_key('gridB'):
self.data_setup.gridB.SetValue(setup_dict['gridB'] == 'True')
else:
self.data_setup.gridB.SetValue(False)
if setup_dict.has_key('logxB'):
self.data_setup.logxB.SetValue(setup_dict['logxB'] == 'True')
else:
self.data_setup.logxB.SetValue(False)
if setup_dict.has_key('logyB'):
self.data_setup.logyB.SetValue(setup_dict['logyB'] == 'True')
else:
self.data_setup.logyB.SetValue(False)
if setup_dict.has_key('xticksB'):
self.data_setup.xticksB.SetValue(setup_dict['xticksB'] == 'True')
else:
self.data_setup.xticksB.SetValue(False)
if setup_dict.has_key('yticksB'):
self.data_setup.yticksB.SetValue(setup_dict['yticksB'] == 'True')
else:
self.data_setup.yticksB.SetValue(False)
if setup_dict.has_key('plotB'):
self.fit.plotB.SetValue(setup_dict['plotB'] == 'True')
else:
self.fit.plotB.SetValue(False)
if setup_dict.has_key('fitB'):
self.fit.fitB.SetValue(setup_dict['fitB'] == 'True')
else:
self.fit.fitB.SetValue(False)
if setup_dict.has_key('func'):
self.fit.func.SetStringSelection(setup_dict['func'])
self.evt_func_change(wx.EVT_CHOICE)
else:
self.fit.func.SetSelection(0)
if setup_dict.has_key('para_list'):
# print setup_dict['para_list']
self.fit.para_list[0].ChangeValue(setup_dict['para_list'][0])
self.fit.para_list[1].ChangeValue(setup_dict['para_list'][1])
self.fit.para_list[2].ChangeValue(setup_dict['para_list'][2])
self.fit.para_list[3].ChangeValue(setup_dict['para_list'][3])
self.fit.para_list[4].ChangeValue(setup_dict['para_list'][4])
self.fit.para_list[5].ChangeValue(setup_dict['para_list'][5])
else:
self.fit.para_list[0].ChangeValue('0')
self.fit.para_list[1].ChangeValue('0')
self.fit.para_list[2].ChangeValue('0')
self.fit.para_list[3].ChangeValue('0')
self.fit.para_list[4].ChangeValue('0')
self.fit.para_list[5].ChangeValue('0')
if setup_dict.has_key('fit_result'):
self.fit.fit_result.ChangeValue(setup_dict['fit_result'])
else:
self.fit.fit_result.ChangeValue('')
self.update_raw_data()
def evt_date_change(self, event):
setup_dict = self.data_sets_list[self.current_row][self.current_column][self.current_data_set].setup_dict
setup_dict['date'] = self.data_setup.date.GetValue()
def evt_shots_change(self, event):
setup_dict = self.data_sets_list[self.current_row][self.current_column][self.current_data_set].setup_dict
setup_dict['shots'] = self.data_setup.shots.GetValue().replace(" ", "")
def evt_X_change(self, event):
setup_dict = self.data_sets_list[self.current_row][self.current_column][self.current_data_set].setup_dict
setup_dict['X'] = self.data_setup.X.GetValue()
def evt_Y_change(self, event):
setup_dict = self.data_sets_list[self.current_row][self.current_column][self.current_data_set].setup_dict
setup_dict['Y'] = self.data_setup.Y.GetValue()
def evt_Xl_change(self, event):
setup_dict = self.data_sets_list[self.current_row][self.current_column][self.current_data_set].setup_dict
setup_dict['Xl'] = self.data_setup.Xl.GetValue()
def evt_Xmin_change(self, event):
setup_dict = self.data_sets_list[self.current_row][self.current_column][self.current_data_set].setup_dict
setup_dict['Xmin'] = self.data_setup.Xmin.GetValue()
def evt_Xmax_change(self, event):
setup_dict = self.data_sets_list[self.current_row][self.current_column][self.current_data_set].setup_dict
setup_dict['Xmax'] = self.data_setup.Xmax.GetValue()
def evt_Yl_change(self, event):
setup_dict = self.data_sets_list[self.current_row][self.current_column][self.current_data_set].setup_dict
setup_dict['Yl'] = self.data_setup.Yl.GetValue()
def evt_Ymin_change(self, event):
setup_dict = self.data_sets_list[self.current_row][self.current_column][self.current_data_set].setup_dict
setup_dict['Ymin'] = self.data_setup.Ymin.GetValue()
def evt_Ymax_change(self, event):
setup_dict = self.data_sets_list[self.current_row][self.current_column][self.current_data_set].setup_dict
setup_dict['Ymax'] = self.data_setup.Ymax.GetValue()
def evt_Legend_change(self, event):
setup_dict = self.data_sets_list[self.current_row][self.current_column][self.current_data_set].setup_dict
setup_dict['Legend'] = self.data_setup.Legend.GetValue()
def evt_color_change(self, event):
setup_dict = self.data_sets_list[self.current_row][self.current_column][self.current_data_set].setup_dict
setup_dict['color'] = self.data_setup.color.GetValue()
def evt_ec_change(self, event):
setup_dict = self.data_sets_list[self.current_row][self.current_column][self.current_data_set].setup_dict
setup_dict['ec'] = self.data_setup.ec.GetValue()
def evt_fmt_change(self, event):
setup_dict = self.data_sets_list[self.current_row][self.current_column][self.current_data_set].setup_dict
setup_dict['fmt'] = self.data_setup.fmt.GetValue()
def evt_ms_change(self, event):
setup_dict = self.data_sets_list[self.current_row][self.current_column][self.current_data_set].setup_dict
setup_dict['ms'] = self.data_setup.ms.GetValue()
def evt_mew_change(self, event):
setup_dict = self.data_sets_list[self.current_row][self.current_column][self.current_data_set].setup_dict
setup_dict['mew'] = self.data_setup.mew.GetValue()
def evt_matchB_change(self, event):
setup_dict = self.data_sets_list[self.current_row][self.current_column][self.current_data_set].setup_dict
setup_dict['matchB'] = 'True' if self.data_setup.matchB.GetValue() else 'False'
# def evt_x2B_change(self, event):
# setup_dict = self.data_sets_list[self.current_row][self.current_column][self.current_data_set].setup_dict
# setup_dict['x2B'] = self.data_setup.x2B.GetValue()
#
# def evt_y2B_change(self, event):
# setup_dict = self.data_sets_list[self.current_row][self.current_column][self.current_data_set].setup_dict
# setup_dict['y2B'] = self.data_setup.y2B.GetValue()
def evt_statsB_change(self, event):
setup_dict = self.data_sets_list[self.current_row][self.current_column][self.current_data_set].setup_dict
setup_dict['statsB'] = 'True' if self.data_setup.statsB.GetValue() else 'False'
def evt_gridB_change(self, event):
setup_dict = self.data_sets_list[self.current_row][self.current_column][self.current_data_set].setup_dict
setup_dict['gridB'] = 'True' if self.data_setup.gridB.GetValue() else 'False'
def evt_logxB_change(self, event):
setup_dict = self.data_sets_list[self.current_row][self.current_column][self.current_data_set].setup_dict
setup_dict['logxB'] = 'True' if self.data_setup.logxB.GetValue() else 'False'
def evt_logyB_change(self, event):
setup_dict = self.data_sets_list[self.current_row][self.current_column][self.current_data_set].setup_dict
setup_dict['logyB'] = 'True' if self.data_setup.logyB.GetValue() else 'False'
def evt_xticksB_change(self, event):
setup_dict = self.data_sets_list[self.current_row][self.current_column][self.current_data_set].setup_dict
setup_dict['xticksB'] = 'True' if self.data_setup.xticksB.GetValue() else 'False'
def evt_yticksB_change(self, event):
setup_dict = self.data_sets_list[self.current_row][self.current_column][self.current_data_set].setup_dict
setup_dict['yticksB'] = 'True' if self.data_setup.yticksB.GetValue() else 'False'
def evt_plotB_change(self, event):
setup_dict = self.data_sets_list[self.current_row][self.current_column][self.current_data_set].setup_dict
setup_dict['plotB'] = 'True' if self.fit.plotB.GetValue() else 'False'
def evt_fitB_change(self, event):
setup_dict = self.data_sets_list[self.current_row][self.current_column][self.current_data_set].setup_dict
setup_dict['fitB'] = 'True' if self.fit.fitB.GetValue() else 'False'
def evt_func_change(self, event):
setup_dict = self.data_sets_list[self.current_row][self.current_column][self.current_data_set].setup_dict
setup_dict['func'] = self.fit.func.GetStringSelection()
self.fit.function = fitdict[setup_dict['func']]
# print setup_dict['func']
# print fitdict[setup_dict['func']].fitexpr
self.fit.tex_function.SetLabel('f(x) = ' + self.fit.function.fitexpr)
def evt_para_list_0_change(self, event):
setup_dict = self.data_sets_list[self.current_row][self.current_column][self.current_data_set].setup_dict
if setup_dict.has_key('para_list') == False:
setup_dict['para_list'] = [ 0 for i in xrange(6)]
setup_dict['para_list'][0] = self.fit.para_list[0].GetValue()
def evt_para_list_1_change(self, event):
setup_dict = self.data_sets_list[self.current_row][self.current_column][self.current_data_set].setup_dict
if setup_dict.has_key('para_list') == False:
setup_dict['para_list'] = [ 0 for i in xrange(6)]
setup_dict['para_list'][1] = self.fit.para_list[1].GetValue()
def evt_para_list_2_change(self, event):
setup_dict = self.data_sets_list[self.current_row][self.current_column][self.current_data_set].setup_dict
if setup_dict.has_key('para_list') == False:
setup_dict['para_list'] = [ 0 for i in xrange(6)]
setup_dict['para_list'][2] = self.fit.para_list[2].GetValue()
def evt_para_list_3_change(self, event):
setup_dict = self.data_sets_list[self.current_row][self.current_column][self.current_data_set].setup_dict
if setup_dict.has_key('para_list') == False:
setup_dict['para_list'] = [ 0 for i in xrange(6)]
setup_dict['para_list'][3] = self.fit.para_list[3].GetValue()
def evt_para_list_4_change(self, event):
setup_dict = self.data_sets_list[self.current_row][self.current_column][self.current_data_set].setup_dict
if setup_dict.has_key('para_list') == False:
setup_dict['para_list'] = [ 0 for i in xrange(6)]
setup_dict['para_list'][4] = self.fit.para_list[4].GetValue()
def evt_para_list_5_change(self, event):
setup_dict = self.data_sets_list[self.current_row][self.current_column][self.current_data_set].setup_dict
if setup_dict.has_key('para_list') == False:
setup_dict['para_list'] = [ 0 for i in xrange(6)]
setup_dict['para_list'][5] = self.fit.para_list[5].GetValue()
class data_setup():
def __init__(self, name, setup_dict):
self.name = name
self.setup_dict = copy.deepcopy(setup_dict)
self.raw_data = ''
def get_data(self):
directory = self.get_dir()
shots = self.setup_dict['shots']
if type(shots) == type([]):
shots = ",".join(shots)
keys = " ".join([self.setup_dict['X'], self.setup_dict['Y']])
self.data, self.errmsg, self.raw_data = qrange.qrange(directory, shots, keys)
s = ''
for i in range(self.data.shape[1]):
col = self.data[:,i]
s00 = numpy.mean(col)
s01 = stats.sem(col)
s02 = numpy.std(col)
s03 = numpy.max(col) - numpy.min(col)
s = s + "Mean = %10.6f\n" % s00
s = s + "Std. deviation = %10.6f\n" % s02
s = s + "Std. Error of the mean = %10.6f\n" % s01
s = s + "Pk-Pk = %10.6f\n" % s03
s = s+ '\n'
self.raw_data = s + self.raw_data
self.sdata = None
if self.setup_dict['X'] == "SEQ:shot":
s = [ numpy.mean(self.data[:,1]), numpy.std(self.data[:,1]), stats.sem(self.data[:,1]),numpy.max(self.data[:,1]) - numpy.min(self.data[:,1]) ]
a = []
for val in s:
a.append( [val for i in range(self.data[:,1].size)])
self.sdata = numpy.c_[self.data[:,0], numpy.transpose(numpy.array(a))]
else:
self.sdata = statdat.statdat(self.data, 0, 1)
def get_dir(self):
year, month, day = self.setup_dict['date'].split('/')
year2 = year[2:4]
return data_dir + '/' + year + '/' + year2+month + '/' + year2+month+day + '/'
def get_plot(self):
func_name = self.setup_dict['func']
function = fitdict[func_name].function
p = [ float(f) for f in self.setup_dict['para_list']]
data = numpy.array(self.data)
self.plotX, self.plotY = plot_function(p, data[:,0], function)
def get_fit(self):
func_name = self.setup_dict['func']
function = fitdict[func_name].function
p = [ float(f) for f in self.setup_dict['para_list']]
data = numpy.array(self.data)
self.para_list_fit, self.error_list_fit = fit_function(p, data, function)
self.fitX, self.fitY = plot_function(self.para_list_fit, data[:,0], function)
self.fit_result_string = 'para' + '\t\t\t' + 'error' + '\n'
for i, para in enumerate(self.para_list_fit):
self.fit_result_string = self.fit_result_string + "{0:.2e}".format(para) + '\t' + "{0:.2e}".format(self.error_list_fit[i]) + '\n'
self.setup_dict['fit_result'] = self.fit_result_string
class DataSetup(wx.Panel):
def __init__(self, parent):
wx.Panel.__init__(self, parent)
self.tex_date = wx.StaticText(self, label = "Date:")
self.date = wx.TextCtrl(self, size = (150,30))
# self.Bind(wx.EVT_TEXT, ControlPanel.evt_date_change, self.date)
self.tex_shots = wx.StaticText(self, label = "Shots:")
self.shots = wx.TextCtrl(self, size = (370,30))
self.tex_X = wx.StaticText(self, label = "X:")
self.X = wx.TextCtrl(self, size = (370,30))
self.tex_Y = wx.StaticText(self, label = "Y:")
self.Y = wx.TextCtrl(self, size = (370,30))
# self.tex_color = wx.StaticText(self, label = "color:")
# self.color = wx.TextCtrl(self, size = (100,30))
grid1 = wx.GridBagSizer(hgap = 5, vgap = 5)
grid1.Add(self.tex_date, pos = (0,0))
grid1.Add(self.date, pos = (0,1))
grid1.Add(self.tex_shots, pos = (1,0))
grid1.Add(self.shots, pos = (1,1))
grid1.Add(self.tex_X, pos = (2,0))
grid1.Add(self.X, pos = (2,1))
grid1.Add(self.tex_Y, pos = (3,0))
grid1.Add(self.Y, pos = (3,1))
# grid1.Add(self.tex_color, pos = (4,0))
# grid1.Add(self.color, pos = (4,1))
#### PLOT SECTION
grid0 = wx.FlexGridSizer(1, 6, 7, 15)
# self.x2B = wx.CheckBox(self, label="X2?")
# self.y2B = wx.CheckBox(self, label="Y2?")
self.statsB = wx.CheckBox(self, label="stats")
self.gridB = wx.CheckBox(self, label="grid")
self.logxB = wx.CheckBox(self, label="logx")
self.logyB = wx.CheckBox(self, label="logy")
self.xticksB = wx.CheckBox(self, label="xticks")
self.yticksB = wx.CheckBox(self, label="yticks")
# grid0.AddMany([(self.x2B), (self.y2B), (self.statsB), (self.gridB), (self.logxB), (self.logyB), (self.xticksB), (self.yticksB) ])
grid0.AddMany([(self.statsB), (self.gridB), (self.logxB), (self.logyB), (self.xticksB), (self.yticksB) ])
grid2 = wx.FlexGridSizer(2, 6, 9, 15)
self.optxlab = wx.StaticText(self, label="Xl")
self.optxmin = wx.StaticText(self, label="Xmin")
self.optxmax = wx.StaticText(self, label="Xmax")
self.optylab = wx.StaticText(self, label="Yl")
self.optymin = wx.StaticText(self, label="Ymin")
self.optymax = wx.StaticText(self, label="Ymax")
self.Xl = wx.TextCtrl(self)
self.Xmin = wx.TextCtrl(self)
self.Xmax = wx.TextCtrl(self)
self.Yl = wx.TextCtrl(self)
self.Ymin = wx.TextCtrl(self)
self.Ymax = wx.TextCtrl(self)
grid2.AddMany([
(self.optxlab), (self.Xl, 2, wx.EXPAND), (self.optxmin), (self.Xmin), (self.optxmax), (self.Xmax),
(self.optylab), (self.Yl, 2, wx.EXPAND), (self.optymin), (self.Ymin), (self.optymax), (self.Ymax)])
grid2.AddGrowableCol(1, 1)
grid3 = wx.FlexGridSizer(1, 2, 9, 15)
self.optleg = wx.StaticText(self, label="Legend")
self.Legend = wx.TextCtrl(self, size = (350,30))
grid3.AddMany([(self.optleg), (self.Legend)])
grid3.AddGrowableCol(1, 1)
grid4 = wx.FlexGridSizer(2,6, 9, 15)
self.optec = wx.StaticText(self, label="fc")
self.optfc = wx.StaticText(self, label="ec")
self.optfmt = wx.StaticText(self, label="fmt")