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Listing class and function to understand better what we are supposed to execute and in which order

Fastq file seems to be defined by

Class DNAsequence method init method window_size method trim

Class qualityScore method init method convert method trim

Class fastqread method init method slide_window method trim_seq method convert_to_fastq_str

There is a file defining function only : Trim_function

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Reimplementing Sickle in python

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