Tested:
+PACS server - Orthanc
+Operating system - Win10
+Python version: 3.7 (don't try on Python 2.x)
- Python 3.7 (include pip and virtualenv) link
- Anaconda (conda in system PATH) link
- Configured PACS Orthanc Server link
- Postgresql Server with created empty database link
First step to run application is create new python virtual environment run before_start.bat or type in command line:
python -m venv livmds_env
.\livmds\Scripts\activate.bat
pip install -r requirements.txt
Get H-DenseUNet from here Find anaconda envs directory and move there H-DenseUNet from zip
Get hd5 file from here Put it to LivMDS\res\HDense-UNet-master_v1\model
To run app you should run you command prompt from app directory and then type or run LivMDS_start.bat:
python LiverMDS.py.py