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model_trainer.py
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model_trainer.py
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import glob
import numpy as np
import os
import shutil
import matplotlib.pyplot as plt
import pandas as pd
from keras.layers import Conv2D, MaxPooling2D, Flatten, Dense, Dropout
from keras.models import Sequential
from keras import optimizers
from keras.preprocessing.image import ImageDataGenerator
from keras.layers import InputLayer
import pickle
class model_trainer:
history = None
batch_size = 100
epochs = 10
steps_per_epoch = 100
total_classes = None
def __init__(self, mode, train, val, train_label, val_label, input_shape, model_name, multiclass):
args = train, train_label, val, val_label, input_shape, model_name
if(multiclass):
self.total_classes = train_label.shape[1]
if mode == "plain_cnn":
self.history = self.plain_cnn(*args)
elif mode == "deep_augmented_cnn":
self.history = self.deep_augmented_cnn(*args)
elif mode == "basic_transferlearning":
self.history = self.basic_transferlearning(*args)
elif mode == "augmented_transferlearning":
self.history = self.augmented_transferlearning(*args)
elif mode == "finetune_transferlearning":
self.history = self.finetune_transferlearning(*args)
self.save_history(self.history, mode, model_name)
def save_history(self, history, mode, model_name):
os.mkdir("history") if not os.path.isdir("history") else None
with open("history/" + mode + "_" + model_name + "_history" , "wb") as file_pi:
pickle.dump(history, file_pi)
def load_history(self, path):
return pickle.load(open(path, "rb"))
def plain_cnn(self, train, train_label, val, val_label, input_shape, model_name):
train_generator = self.scale_data(train, train_label)
val_generator = self.scale_data(val, val_label)
model = Sequential()
model.add(Conv2D(16, kernel_size=(3, 3), activation='relu',
input_shape=input_shape))
model.add(MaxPooling2D(pool_size=(2, 2)))
model.add(Conv2D(64, kernel_size=(3, 3), activation='relu'))
model.add(MaxPooling2D(pool_size=(2, 2)))
model.add(Conv2D(128, kernel_size=(3, 3), activation='relu'))
model.add(MaxPooling2D(pool_size=(2, 2)))
model.add(Flatten())
model.add(Dense(512, activation='relu'))
if(self.total_classes):
model.add(Dense(self.total_classes, activation="softmax"))
else:
model.add(Dense(1, activation='sigmoid'))
model.compile(loss='binary_crossentropy',
optimizer=optimizers.RMSprop(),
metrics=['accuracy'])
model.summary()
model.save("plain_cnn_" + model_name + ".h5")
return model.fit(train_generator, steps_per_epoch=self.steps_per_epoch, epochs=self.epochs,
validation_data=val_generator, validation_steps=50, verbose=1)
def deep_augmented_cnn(self, train, train_label, val, val_label, input_shape, model_name):
[train_generator, val_generator] = self.augment_data(train, val, train_label, val_label)
model = Sequential()
model.add(Conv2D(16, kernel_size=(3, 3), activation='relu',
input_shape=input_shape))
model.add(MaxPooling2D(pool_size=(2, 2)))
model.add(Conv2D(64, kernel_size=(3, 3), activation='relu'))
model.add(MaxPooling2D(pool_size=(2, 2)))
model.add(Conv2D(128, kernel_size=(3, 3), activation='relu'))
model.add(MaxPooling2D(pool_size=(2, 2)))
model.add(Conv2D(128, kernel_size=(3, 3), activation='relu'))
model.add(MaxPooling2D(pool_size=(2, 2)))
model.add(Flatten())
model.add(Dense(512, activation='relu'))
model.add(Dropout(0.3))
model.add(Dense(512, activation='relu'))
model.add(Dropout(0.3))
if(self.total_classes):
model.add(Dense(self.total_classes, activation="softmax"))
else:
model.add(Dense(1, activation='sigmoid'))
model.compile(loss='binary_crossentropy',
optimizer=optimizers.RMSprop(lr=1e-4),
metrics=['accuracy'])
history = model.fit_generator(train_generator, steps_per_epoch=self.steps_per_epoch, epochs=self.epochs*2,
validation_data=val_generator, validation_steps=50, verbose=1)
model.save("deep_augmented_cnn_" + model_name + ".h5")
return history
def basic_transferlearning(self, train, train_label, val, val_label, input_shape, model_name):
vgg_model = self.import_vgg_model(input_shape)
train_features = self.get_bottleneck_features(vgg_model, self.scale_bottleneck(train))
val_features = self.get_bottleneck_features(vgg_model, self.scale_bottleneck(val))
input_shape = vgg_model.output_shape[1]
model = Sequential()
model.add(InputLayer(input_shape=(input_shape,)))
model.add(Dense(512, activation='relu', input_dim=input_shape))
model.add(Dropout(0.3))
model.add(Dense(512, activation='relu'))
model.add(Dropout(0.3))
if(self.total_classes):
model.add(Dense(self.total_classes, activation="softmax"))
else:
model.add(Dense(1, activation='sigmoid'))
model.compile(loss='binary_crossentropy',
optimizer=optimizers.RMSprop(lr=1e-4),
metrics=['accuracy'])
model.summary()
history = model.fit(x=train_features, y=train_label,
validation_data=(val_features, val_label),
batch_size=self.batch_size,
epochs=100,
verbose=1)
model.save("basic_transferlearning_"+ model_name + ".h5")
return history
def augmented_transferlearning(self, train, train_label, val, val_label, input_shape, model_name):
[train_generator, val_generator] = self.augment_data(train_imgs=train, val_imgs=val,train_label=train_label,val_label = val_label)
vgg_model = self.import_vgg_model(input_shape)
model = Sequential()
model.add(vgg_model)
model.add(Dense(512, activation='relu', input_dim=input_shape))
model.add(Dropout(0.3))
model.add(Dense(512, activation='relu'))
model.add(Dropout(0.3))
if(self.total_classes):
model.add(Dense(self.total_classes, activation="softmax"))
else:
model.add(Dense(1, activation='sigmoid'))
model.compile(loss='binary_crossentropy',
optimizer=optimizers.RMSprop(lr=2e-5),
metrics=['accuracy'])
history = model.fit_generator(train_generator, steps_per_epoch=self.steps_per_epoch, epochs=self.epochs*2,
validation_data=val_generator, validation_steps=50,
verbose=1)
model.save("augmented_tf_" + model_name + ".h5")
return history
def finetune_transferlearning(self, train, train_label, val, val_label, input_shape, model_name):
[train_generator, val_generator] = self.augment_data(train_imgs=train, val_imgs=val,train_label=train_label,val_label = val_label)
vgg_model = self.import_vgg_model(input_shape)
vgg_model = self.set_vgg_trainable(vgg_model)
model = Sequential()
model.add(vgg_model)
model.add(Dense(512, activation='relu', input_dim=input_shape))
model.add(Dropout(0.3))
model.add(Dense(512, activation='relu'))
model.add(Dropout(0.3))
if(self.total_classes):
model.add(Dense(self.total_classes, activation="softmax"))
else:
model.add(Dense(1, activation='sigmoid'))
model.compile(loss='binary_crossentropy',
optimizer=optimizers.RMSprop(lr=1e-5),
metrics=['accuracy'])
history = model.fit_generator(train_generator, steps_per_epoch=self.steps_per_epoch, epochs=5,
validation_data=val_generator, validation_steps=50,
verbose=1)
model.save("finetuned_" + model_name + ".h5")
return history
def import_vgg_model(self, input_shape):
#TODO find out what this section is actually doing
from keras.applications import vgg16
from keras.models import Model
import keras
vgg = vgg16.VGG16(include_top = False, weights = "imagenet", input_shape=input_shape)
output = vgg.layers[-1].output
output = keras.layers.Flatten()(output)
#TODO find out why model is defined with vgg input and its output, seems unnecessary
vgg_model = Model(vgg.input, output)
vgg_model.trainable = False
for layer in vgg_model.layers:
layer.trainable = False
return vgg_model
def scale_bottleneck(self, imgs):
imgs = np.array(imgs)
imgs_scaled = imgs.astype("float32")
imgs_scaled /= 255
return imgs_scaled
def scale_data(self, imgs, labels):
data = ImageDataGenerator(rescale=1./255)
generator = data.flow(imgs, labels, batch_size=30)
return generator
def augment_data(self, train_imgs, val_imgs, train_label, val_label):
train_datagen = ImageDataGenerator(rescale=1./255, zoom_range=0.3, rotation_range=50,
width_shift_range=0.2, height_shift_range=0.2, shear_range=0.2,
horizontal_flip=True, fill_mode="nearest")
val_datagen = ImageDataGenerator(rescale=1./255)
train_generator = train_datagen.flow(train_imgs, train_label, batch_size=30)
val_generator = val_datagen.flow(val_imgs, val_label, batch_size=30)
return train_generator, val_generator
def set_vgg_trainable(self, vgg_model):
vgg_model.trainable = True
set_trainable = False
for layer in vgg_model.layers:
if layer.name in ["block5_conv1", "block4_conv1"]:
set_trainable = True
if set_trainable:
layer.trainable = True
else:
layer.trainable = False
return vgg_model
def get_bottleneck_features(self, model, images):
return model.predict(images, verbose=0)
def plot(self, history):
plt.plot(history.history['accuracy'])
plt.plot(history.history['val_accuracy'])
plt.title('model accuracy')
plt.ylabel('accuracy')
plt.xlabel('epoch')
plt.legend(['train', 'validation'], loc='upper left')
plt.show()
# summarize history for loss
plt.plot(history.history['loss'])
plt.plot(history.history['val_loss'])
plt.title('model loss')
plt.ylabel('loss')
plt.xlabel('epoch')
plt.legend(['train', 'validation'], loc='upper left')
plt.show()
def visualize_vgg_trainable(self, vgg_model):
pd.set_option("max_colwidth", 1)
layers = [(layer, layer.name, layer.trainable) for layer in vgg_model.layers]
df = pd.DataFrame(layers, columns=["Layer Type", "Layer Name", "Layer Trainable"])
print(df)
def set_batch_size(self, new_size):
self.batch = new_size
def set_epochs(self, new_size):
self.epochs = new_size
def set_steps_per_epoch(self, steps):
self.steps_per_epoch = steps
def main():
import preproc_cable as pc
import preproc_transition as pt
modes = ["basic_transferlearning", "augmented_transferlearning", "finetune_transferlearning"]
"""
p_cable = pc.preproc_cable("/home/sina/Documents/abb/pictures/good_candidate")
#settings
input_shape = [460, 460, 3]
model_name = "cable"
#mt = model_trainer(mode, p_cable.train_imgs, p_cable.val_imgs, p_cable.train_labels, p_cable.val_labels, input_shape, model_name, True)
for mode in modes:
mt = model_trainer(mode, p_cable.train_imgs, p_cable.val_imgs, p_cable.train_labels, p_cable.val_labels, input_shape, model_name, True)
"""
transfiles_path = "/home/sina/Documents/abb/refined_data/patches/trans/*"
non_transfiles_path = "/home/sina/Documents/abb/refined_data/patches/non_trans/*"
p_trans = pt.preproc_transition(transfiles_path, non_transfiles_path)
#settings
input_shape = [150,150,3]
model_name = "trans"
for mode in modes:
mt = model_trainer(mode, p_trans.train_imgs, p_trans.validation_imgs, p_trans.encoded_train_label, p_trans.encoded_val_label, input_shape, model_name, False)
"""
for mode in modes:
history = mt.load_history("history/" + mode + "_cable" + "_history")
mt.plot(history)
"""
if __name__ == "__main__":
main()