GitHub - tjacobs2/scripts: A collection of scripts (not all of which were written by me) that I use for various protein design tasks

A collection of script that I find useful for protein design tasks

Name		Name	Last commit message	Last commit date
Latest commit History 17 Commits
ProFitV3.1		ProFitV3.1
match		match
pdbTools_0.2.1		pdbTools_0.2.1
psipred3.3		psipred3.3
.gitignore		.gitignore
README.md		README.md
bkill		bkill
check_frag_quality.sh		check_frag_quality.sh
cleanTERs.sh		cleanTERs.sh
concentration_calculator.pl		concentration_calculator.pl
convert_hatm_names.py		convert_hatm_names.py
count_goodfrag.pl		count_goodfrag.pl
create_resources.sh		create_resources.sh
filter_score_file.py		filter_score_file.py
find_large_git_files.rb		find_large_git_files.rb
funnel_metric.py		funnel_metric.py
generate_pubmed_search.py		generate_pubmed_search.py
git-new-workdir.sh		git-new-workdir.sh
list_mutations.pl		list_mutations.pl
list_mutations_energies.pl		list_mutations_energies.pl
make_fragments.py		make_fragments.py
msd_parser.py		msd_parser.py
pdb2fasta.pl		pdb2fasta.pl
pdbFetcher.sh		pdbFetcher.sh
pdbMutationsToCSV.py		pdbMutationsToCSV.py
pdbScoresToCSV.sh		pdbScoresToCSV.sh
pdbToRosettaResnum.pl		pdbToRosettaResnum.pl
pdb_chain_selector.py		pdb_chain_selector.py
pdbcopy.sh		pdbcopy.sh
print_fold_tree.sh		print_fold_tree.sh
print_score_cols.sh		print_score_cols.sh
profit		profit
proj_copy.py		proj_copy.py
score_plotting.tgz		score_plotting.tgz
split_for_pymol.sh		split_for_pymol.sh
subl		subl
submit_dependent_script.py		submit_dependent_script.py
templateGenerator.sh		templateGenerator.sh
windows_fixer.pl		windows_fixer.pl

tjacobs2/scripts