Inferring Gene Regulatory Networks from Single Cell RNA-seq Temporal Snapshot Data Requires Higher Order Moments
No-I Model: mRNA A: A_MRNA_No_UpRegulation.py and for mRNA: B_MRNA_No_UpRegulation.py
(after separated runs, the datasets were collated in one)
Mono-I Model: MRNA_Single_UpRegulation.py
Bi-I Model: MRNA_Double_UpRegulation.py
Perform batch inference of replicate datasets Run_Multiple_mRNA_Inference.py
Run batch inference for several models Batch_Run.py
Simulate SSA: Sim_SSA.py
Run SSA: using true parameter SSA_K_true.py and using infered parameters SSA_runs
Pameter inference for linear MBI and nonlinear MBI methods: Inference.py