def setupComponent(self, atoms, bonds):
"""(atoms, bonds) setup to draw a portion of the molecule using
only atoms and bonds."""
m = self.molecule
if m is None:
return
points, lines, circles, self.bbox, self.md = generateDrawables(m.atoms, m.bonds, drawAromatic=0)
self.points, self.lines, self.circles, bbox, self.md = \
generateDrawables(atoms, bonds, self.drawAromatic)
def drawComponent(self, atoms, bonds, drawAromatic=1):
"""(atoms, bonds, drawAromatic=1) draw a portion of the molecule using
only atoms and bonds. set drawAromatic to zero if aromatic rings are
not desired"""
m = self.molecule
if m is None:
return
points, lines, circles, self.wedges, self.bbox, self.md = generateDrawables(m.atoms, m.bonds, drawAromatic=0)
self.points, self.lines, self.circles, self.wedges, bbox, self.md = \
generateDrawables(atoms, bonds, drawAromatic=drawAromatic)
def drawComponent(self, atoms, bonds, drawAromatic=1):
"""(atoms, bonds, drawAromatic=1) draw a portion of the molecule using
only atoms and bonds. set drawAromatic to zero if aromatic rings are
not desired"""
m = self.molecule
if m is None:
return
points, lines, circles, self.wedges, self.bbox, self.md = generateDrawables(
m.atoms, m.bonds, drawAromatic=0)
self.points, self.lines, self.circles, self.wedges, bbox, self.md = \
generateDrawables(atoms, bonds, drawAromatic=drawAromatic)
def setupMolecule(self):
"""->setup to draw the entire molecule"""
if self.molecule:
m = self.molecule
self.points, self.lines, self.circles, self.bbox, self.md = \
generateDrawables(m.atoms, m.bonds, self.drawAromatic)
else:
self.points, self.lines, self.circles, self.bbox, self.md = None, None, None, None
def drawMolecule(self, drawAromatic=1):
"""(drawAromatic=1) draw the current molecule set drawAromatic to 0
if drawing of aromatic rings is not desired"""
if self.molecule:
m = self.molecule
self.points, self.lines, self.circles, self.wedges, self.bbox, self.md = \
generateDrawables(m.atoms, m.bonds, drawAromatic=drawAromatic)
else:
self.points, self.lines, self.circles, self.wedges, \
self.bbox, self.md = None, None, None, None
def drawMolecule(self, drawAromatic=1):
"""(drawAromatic=1) draw the current molecule set drawAromatic to 0
if drawing of aromatic rings is not desired"""
if self.molecule:
m = self.molecule
self.points, self.lines, self.circles, self.wedges, self.bbox, self.md = \
generateDrawables(m.atoms, m.bonds, drawAromatic=drawAromatic)
else:
self.points, self.lines, self.circles, self.wedges, \
self.bbox, self.md = None, None, None, None
