def load_from_dir(self, dir_path=None):
if not dir_path:
dir_path = self.directory
for root, directories, filenames in walk(dir_path):
for filename in filenames:
if filename.endswith("_fastqc.zip"):
path = join(root, filename)
data = FastqcData(path)
for module in data.parse_modules(path):
data.modules[module.table_name] = module
self.fastqc_records[data.fastqc_zip] = data
def load_from_dir(self, dir_path, create=False):
created = False
for root, directories, filenames in walk(dir_path):
for filename in filenames:
if filename.endswith("_fastqc.zip"):
path = join(root, filename)
data = FastqcData(path)
data.populate_from_file()
if create and not created:
created = True
print("Creating Tables")
self.create_db(data=data)
self.insert(data)
