Python referenceDatabase Examples

Example #1

File: NGSPipeline.py Project: bjpop/ngs-pipeline

def sequential(options):
    referenceDatabase(options)
    bams = seqs2Bams(options)
    mergeAndPileup(options, bams)

Example #2

File: ReferenceDatabase.py Project: bjpop/ngs-pipeline

def main():
    options = getOptions()
    initLogger(options['logging'])
    referenceDatabase(options)

Example #3

File: NGSPipeline.py Project: boratonAJ/ngs-pipeline

def sequential(options):
    referenceDatabase(options)
    bams = seqs2Bams(options)
    mergeAndPileup(options, bams)

Example #4

File: ReferenceDatabase.py Project: boratonAJ/ngs-pipeline

def main():
    options = getOptions()
    initLogger(options['logging'])
    referenceDatabase(options)