def test_search_workflows( self ):
workflow_populator = WorkflowPopulator( self )
workflow_id = workflow_populator.simple_workflow( "test_for_search" )
search_response = self.__search( "select * from workflow" )
assert self.__has_result_with_name( search_response, "test_for_search (imported from API)" ), search_response.json()
# Deleted
delete_url = self._api_url( "workflows/%s" % workflow_id, use_key=True )
delete_request( delete_url )
search_response = self.__search( "select * from workflow where not deleted" )
assert not self.__has_result_with_name( search_response, "test_for_search (imported from API)" ), search_response.json()
def test_search_workflows(self):
workflow_populator = WorkflowPopulator(self.galaxy_interactor)
workflow_id = workflow_populator.simple_workflow("test_for_search")
search_response = self.__search("select * from workflow")
assert self.__has_result_with_name(
search_response,
"test_for_search (imported from API)"), search_response.json()
# Deleted
delete_url = self._api_url("workflows/%s" % workflow_id, use_key=True)
delete_request(delete_url)
search_response = self.__search(
"select * from workflow where deleted = False")
assert not self.__has_result_with_name(
search_response,
"test_for_search (imported from API)"), search_response.json()
def test_delete( self ):
hda1 = self._new_dataset( self.history_id )
self._wait_for_history( self.history_id )
assert str( self.__show( hda1 ).json()[ "deleted" ] ).lower() == "false"
url = self._api_url( "histories/%s/contents/%s" % ( self.history_id, hda1["id" ] ), use_key=True )
delete_response = delete_request( url )
assert delete_response.status_code < 300 # Something in the 200s :).
assert str( self.__show( hda1 ).json()[ "deleted" ] ).lower() == "true"
def test_other_cannot_delete(self):
workflow_id = self.workflow_populator.simple_workflow(
"test_other_delete")
with self._different_user():
workflow_url = self._api_url("workflows/%s" % workflow_id,
use_key=True)
delete_response = delete_request(workflow_url)
self._assert_status_code_is(delete_response, 403)
def test_delete(self):
workflow_id = self.workflow_populator.simple_workflow("test_delete")
workflow_name = "test_delete (imported from API)"
self._assert_user_has_workflow_with_name(workflow_name)
workflow_url = self._api_url("workflows/%s" % workflow_id, use_key=True)
delete_response = delete_request(workflow_url)
self._assert_status_code_is(delete_response, 200)
# Make sure workflow is no longer in index by default.
assert workflow_name not in self.__workflow_names()
def test_delete(self):
hda1 = self._new_dataset(self.history_id)
self._wait_for_history(self.history_id)
assert str(self.__show(hda1).json()["deleted"]).lower() == "false"
url = self._api_url("histories/%s/contents/%s" %
(self.history_id, hda1["id"]),
use_key=True)
delete_response = delete_request(url)
assert delete_response.status_code < 300 # Something in the 200s :).
assert str(self.__show(hda1).json()["deleted"]).lower() == "true"
def test_delete(self):
workflow_id = self.workflow_populator.simple_workflow("test_delete")
workflow_name = "test_delete (imported from API)"
self._assert_user_has_workflow_with_name(workflow_name)
workflow_url = self._api_url("workflows/%s" % workflow_id,
use_key=True)
delete_response = delete_request(workflow_url)
self._assert_status_code_is(delete_response, 200)
# Make sure workflow is no longer in index by default.
assert workflow_name not in self.__workflow_names()
def test_dataset_collections(self):
payload = self.dataset_collection_populator.create_pair_payload(
self.history_id, type="dataset_collection")
pre_collection_count = self.__count_contents(type="dataset_collection")
pre_dataset_count = self.__count_contents(type="dataset")
pre_combined_count = self.__count_contents(
type="dataset,dataset_collection")
dataset_collection_response = self._post(
"histories/%s/contents" % self.history_id, payload)
dataset_collection = self.__check_create_collection_response(
dataset_collection_response)
post_collection_count = self.__count_contents(
type="dataset_collection")
post_dataset_count = self.__count_contents(type="dataset")
post_combined_count = self.__count_contents(
type="dataset,dataset_collection")
# Test filtering types with index.
assert pre_collection_count == 0
assert post_collection_count == 1
assert post_combined_count == pre_dataset_count + 1
assert post_combined_count == pre_combined_count + 1
assert pre_dataset_count == post_dataset_count
# Test show dataset colleciton.
collection_url = "histories/%s/contents/dataset_collections/%s" % (
self.history_id, dataset_collection["id"])
show_response = self._get(collection_url)
self._assert_status_code_is(show_response, 200)
dataset_collection = show_response.json()
self._assert_has_keys(dataset_collection, "url", "name", "deleted")
assert not dataset_collection["deleted"]
delete_response = delete_request(
self._api_url(collection_url, use_key=True))
self._assert_status_code_is(delete_response, 200)
show_response = self._get(collection_url)
dataset_collection = show_response.json()
assert dataset_collection["deleted"]
def test_dataset_collections( self ):
payload = self.dataset_collection_populator.create_pair_payload(
self.history_id,
type="dataset_collection"
)
pre_collection_count = self.__count_contents( type="dataset_collection" )
pre_dataset_count = self.__count_contents( type="dataset" )
pre_combined_count = self.__count_contents( type="dataset,dataset_collection" )
dataset_collection_response = self._post( "histories/%s/contents" % self.history_id, payload )
dataset_collection = self.__check_create_collection_response( dataset_collection_response )
post_collection_count = self.__count_contents( type="dataset_collection" )
post_dataset_count = self.__count_contents( type="dataset" )
post_combined_count = self.__count_contents( type="dataset,dataset_collection" )
# Test filtering types with index.
assert pre_collection_count == 0
assert post_collection_count == 1
assert post_combined_count == pre_dataset_count + 1
assert post_combined_count == pre_combined_count + 1
assert pre_dataset_count == post_dataset_count
# Test show dataset colleciton.
collection_url = "histories/%s/contents/dataset_collections/%s" % ( self.history_id, dataset_collection[ "id" ] )
show_response = self._get( collection_url )
self._assert_status_code_is( show_response, 200 )
dataset_collection = show_response.json()
self._assert_has_keys( dataset_collection, "url", "name", "deleted" )
assert not dataset_collection[ "deleted" ]
delete_response = delete_request( self._api_url( collection_url, use_key=True ) )
self._assert_status_code_is( delete_response, 200 )
show_response = self._get( collection_url )
dataset_collection = show_response.json()
assert dataset_collection[ "deleted" ]
def test_other_cannot_delete(self):
workflow_id = self.workflow_populator.simple_workflow("test_other_delete")
with self._different_user():
workflow_url = self._api_url("workflows/%s" % workflow_id, use_key=True)
delete_response = delete_request(workflow_url)
self._assert_status_code_is(delete_response, 403)
def test_403_on_delete_unowned_page( self ):
page_response = self._create_valid_page_as( "*****@*****.**", "otherspage" )
delete_response = delete_request( self._api_url( "pages/%s" % page_response[ "id" ], use_key=True ) )
self._assert_status_code_is( delete_response, 403 )
self._assert_error_code_is( delete_response, error_codes.USER_DOES_NOT_OWN_ITEM )
def test_404_on_delete_unknown_page( self ):
delete_response = delete_request( self._api_url( "pages/%s" % self._random_key(), use_key=True ) )
self._assert_status_code_is( delete_response, 404 )
self._assert_error_code_is( delete_response, error_codes.USER_OBJECT_NOT_FOUND )
def test_delete( self ):
response_json = self._create_valid_page_with_slug( "testdelete" )
delete_response = delete_request( self._api_url( "pages/%s" % response_json[ 'id' ], use_key=True ) )
self._assert_status_code_is( delete_response, 200 )