def main(spikes_file_path, with_histogram, with_labels, group_by,
nodes_file_path, node_types_file_path):
"""
Generates spike raster plot from L4 simulation output.
:param spikes_file_path: str (path)
:param with_histogram: bool
:param with_labels: list of str
:param group_by: str
:param nodes_file_path: str (path)
:param node_types_file_path: str (path)
"""
plt.figure('Raster')
plot_raster(spikes_file_path,
with_histogram=with_histogram,
with_labels=with_labels,
group_by=group_by,
show_plot=False,
nodes_file=nodes_file_path,
node_types_file=node_types_file_path)
plt.show()
from bmtk.analyzer.visualization.spikes import plot_raster, plot_rates
import matplotlib.pyplot as plt
# Raster plot of the v1 spikes.
plt.figure('Raster')
plot_raster('output/spikes.h5',
with_histogram=True,
with_labels=['v1'],
show_plot=False)
plt.figure('Rates')
plot_rates('output/spikes.h5', show_plot=False)
plt.show()
from bmtk.analyzer.visualization.spikes import plot_raster, plot_rates
import matplotlib.pyplot as plt
plt.figure('Raster')
plot_raster('output/spikes.h5',
with_histogram=True,
with_labels=['v1'],
nodes_file='network/internal_nodes.h5',
node_types_file='network/internal_node_types.csv',
group_by='model_name',
show_plot=False)
plt.figure('Rates')
plot_rates('output/spikes.h5',
smoothed=True,
nodes_file='network/internal_nodes.h5',
node_types_file='network/internal_node_types.csv',
group_by='model_name',
show_plot=False)
plt.show()