def test_keep_if_more_other(self):
"""keep_if_more_other should be True if #other items > x"""
self.assertRaises(ValueError, keep_if_more_other,'lksfj','ks') #not int
self.assertRaises(IndexError,keep_if_more_other,'ACGU',-3) #negative
f = keep_if_more_other('a',0) #zero
self.assertEqual(f(''),0)
self.assertEqual(f('a'),0)
self.assertEqual(f('b'),1)
# works on strings
f = keep_if_more_other('ACGU',5) #positive
self.assertEqual(f(''),0)
self.assertEqual(f('ACGUNNNNN'),0)
self.assertEqual(f('ACGUAGCUioooNNNNNA'),1)
self.assertEqual(f('NNNNNNN'),1)
# works on words
f = keep_if_more_other(['foo'],1)
self.assertEqual(f(''),0)
self.assertEqual(f(['foo', 'bar','foo']),0)
self.assertEqual(f(['joe','oef']),1)
# works on numbers
f = keep_if_more_other([0,1],3)
self.assertEqual(f(''),0)
self.assertEqual(f([0,1,2,3,4,5]),1)
self.assertEqual(f([0,1,0,1]),0)
def test_keep_if_more_other(self):
"""keep_if_more_other should be True if #other items > x"""
self.assertRaises(ValueError, keep_if_more_other, 'lksfj',
'ks') #not int
self.assertRaises(IndexError, keep_if_more_other, 'ACGU',
-3) #negative
f = keep_if_more_other('a', 0) #zero
self.assertEqual(f(''), 0)
self.assertEqual(f('a'), 0)
self.assertEqual(f('b'), 1)
# works on strings
f = keep_if_more_other('ACGU', 5) #positive
self.assertEqual(f(''), 0)
self.assertEqual(f('ACGUNNNNN'), 0)
self.assertEqual(f('ACGUAGCUioooNNNNNA'), 1)
self.assertEqual(f('NNNNNNN'), 1)
# works on words
f = keep_if_more_other(['foo'], 1)
self.assertEqual(f(''), 0)
self.assertEqual(f(['foo', 'bar', 'foo']), 0)
self.assertEqual(f(['joe', 'oef']), 1)
# works on numbers
f = keep_if_more_other([0, 1], 3)
self.assertEqual(f(''), 0)
self.assertEqual(f([0, 1, 2, 3, 4, 5]), 1)
self.assertEqual(f([0, 1, 0, 1]), 0)
def test_keep_if_more_other(self):
"""keep_if_more_other should be True if #other items > x"""
self.assertRaises(ValueError, keep_if_more_other, "lksfj", "ks") # not int
self.assertRaises(IndexError, keep_if_more_other, "ACGU", -3) # negative
f = keep_if_more_other("a", 0) # zero
self.assertEqual(f(""), 0)
self.assertEqual(f("a"), 0)
self.assertEqual(f("b"), 1)
# works on strings
f = keep_if_more_other("ACGU", 5) # positive
self.assertEqual(f(""), 0)
self.assertEqual(f("ACGUNNNNN"), 0)
self.assertEqual(f("ACGUAGCUioooNNNNNA"), 1)
self.assertEqual(f("NNNNNNN"), 1)
# works on words
f = keep_if_more_other(["foo"], 1)
self.assertEqual(f(""), 0)
self.assertEqual(f(["foo", "bar", "foo"]), 0)
self.assertEqual(f(["joe", "oef"]), 1)
# works on numbers
f = keep_if_more_other([0, 1], 3)
self.assertEqual(f(""), 0)
self.assertEqual(f([0, 1, 2, 3, 4, 5]), 1)
self.assertEqual(f([0, 1, 0, 1]), 0)
def test_init(self):
"""Filter should init as expected"""
empty_filter = Filter('',{})
named_empty_filter = Filter('Archaea',{})
self.assertEqual(empty_filter,{})
self.assertEqual(empty_filter.Name,'')
self.assertEqual(named_empty_filter,{})
self.assertEqual(named_empty_filter.Name,'Archaea')
f = find_all('abcd')
g = keep_if_more_other('ab',7)
fil = Filter('Archaea',{'Arch':[f,g]})
assert fil['Arch'][0] is f
assert fil['Arch'][1] is g
def test_init(self):
"""Filter should init as expected"""
empty_filter = Filter('', {})
named_empty_filter = Filter('Archaea', {})
self.assertEqual(empty_filter, {})
self.assertEqual(empty_filter.Name, '')
self.assertEqual(named_empty_filter, {})
self.assertEqual(named_empty_filter.Name, 'Archaea')
f = find_all('abcd')
g = keep_if_more_other('ab', 7)
fil = Filter('Archaea', {'Arch': [f, g]})
assert fil['Arch'][0] is f
assert fil['Arch'][1] is g