Example #1
0
def create_backprojection3d_gpu(data, proj_geom, vol_geom, returnData=True):
    """Create a backprojection of a sinogram (3D) using CUDA.

:param data: Sinogram data or ID.
:type data: :class:`numpy.ndarray` or :class:`int`
:param proj_geom: Projection geometry.
:type proj_geom: :class:`dict`
:param vol_geom: Volume geometry.
:type vol_geom: :class:`dict`
:param returnData: If False, only return the ID of the backprojection.
:type returnData: :class:`bool`
:returns: :class:`int` or (:class:`int`, :class:`numpy.ndarray`) -- If ``returnData=False``, returns the ID of the backprojection. Otherwise, returns a tuple containing the ID of the backprojection and the backprojection itself, in that order.

"""
    if isinstance(data, np.ndarray):
        sino_id = data3d.create("-sino", proj_geom, data)
    else:
        sino_id = data

    vol_id = data3d.create("-vol", vol_geom, 0)

    cfg = astra_dict("BP3D_CUDA")
    cfg["ProjectionDataId"] = sino_id
    cfg["ReconstructionDataId"] = vol_id
    alg_id = algorithm.create(cfg)
    algorithm.run(alg_id)
    algorithm.delete(alg_id)

    if isinstance(data, np.ndarray):
        data3d.delete(sino_id)

    if returnData:
        return vol_id, data3d.get(vol_id)
    else:
        return vol_id
Example #2
0
def create_sino3d_gpu(data, proj_geom, vol_geom, returnData=True, gpuIndex=None):
    """Create a forward projection of an image (3D).

:param data: Image data or ID.
:type data: :class:`numpy.ndarray` or :class:`int`
:param proj_geom: Projection geometry.
:type proj_geom: :class:`dict`
:param vol_geom: Volume geometry.
:type vol_geom: :class:`dict`
:param returnData: If False, only return the ID of the forward projection.
:type returnData: :class:`bool`
:param gpuIndex: Optional GPU index.
:type gpuIndex: :class:`int`
:returns: :class:`int` or (:class:`int`, :class:`numpy.ndarray`) -- If ``returnData=False``, returns the ID of the forward projection. Otherwise, returns a tuple containing the ID of the forward projection and the forward projection itself, in that order.

"""

    if isinstance(data, np.ndarray):
        volume_id = data3d.create("-vol", vol_geom, data)
    else:
        volume_id = data
    sino_id = data3d.create("-sino", proj_geom, 0)
    algString = "FP3D_CUDA"
    cfg = astra_dict(algString)
    if not gpuIndex == None:
        cfg["option"] = {"GPUindex": gpuIndex}
    cfg["ProjectionDataId"] = sino_id
    cfg["VolumeDataId"] = volume_id
    alg_id = algorithm.create(cfg)
    algorithm.run(alg_id)
    algorithm.delete(alg_id)

    if isinstance(data, np.ndarray):
        data3d.delete(volume_id)
    if returnData:
        return sino_id, data3d.get(sino_id)
    else:
        return sino_id
Example #3
0
def create_sino3d_gpu(data, proj_geom, vol_geom, returnData=True, gpuIndex=None):
    """Create a forward projection of an image (3D).

:param data: Image data or ID.
:type data: :class:`numpy.ndarray` or :class:`int`
:param proj_geom: Projection geometry.
:type proj_geom: :class:`dict`
:param vol_geom: Volume geometry.
:type vol_geom: :class:`dict`
:param returnData: If False, only return the ID of the forward projection.
:type returnData: :class:`bool`
:param gpuIndex: Optional GPU index.
:type gpuIndex: :class:`int`
:returns: :class:`int` or (:class:`int`, :class:`numpy.ndarray`) -- If ``returnData=False``, returns the ID of the forward projection. Otherwise, returns a tuple containing the ID of the forward projection and the forward projection itself, in that order.

"""

    if isinstance(data, np.ndarray):
        volume_id = data3d.create('-vol', vol_geom, data)
    else:
        volume_id = data
    sino_id = data3d.create('-sino', proj_geom, 0)
    algString = 'FP3D_CUDA'
    cfg = astra_dict(algString)
    if not gpuIndex==None:
        cfg['option']={'GPUindex':gpuIndex}
    cfg['ProjectionDataId'] = sino_id
    cfg['VolumeDataId'] = volume_id
    alg_id = algorithm.create(cfg)
    algorithm.run(alg_id)
    algorithm.delete(alg_id)

    if isinstance(data, np.ndarray):
        data3d.delete(volume_id)
    if returnData:
        return sino_id, data3d.get(sino_id)
    else:
        return sino_id