def createOutputs(clip):
"""
Read in a clip and create outputs.
and appends results to a table (logTableFile)
"""
#Some of this needs to not be hardwired here. This is ugly.
clip['config']['exportLoc'] = '/soc/nfs/so-nfs/dave/c7-pdc/'
clip['config']['onepageBasename'] = clip['config']['exportLoc']
clip['config']['dataStorePath'] = '/home/smullall/Science/datastore'
epic = str(int(clip.value))
#print clip.serve
try:
clip.serve.time
except AttributeError:
clip = dpp.serveLocalTask(clip)
print 'hi serve'
print clip.serve
try:
print clip.exception
except AttributeError:
pass
#dpp.plotTask(clip)
cmd = ""
try:
if clip.disposition.isSignificantEvent:
clip['config']['stellarPar'] = [
'Mass', 'Rad', 'Teff', 'dis', 'rho', 'prov', 'logg'
]
#clip['config']['stellarFile']='/home/smullall/Science/DAVE/dave/etc/k2EpicCatalogStellarTable5.txt'
clip = stel.addStellarToClip(clip)
clip = stel.estimatePlanetProp(clip)
outfile = "%s/%s/epic%s-mp.pdf" % (clip.config['exportLoc'], epic,
epic)
mpp.plot_multipages(outfile, clip, outfile)
#fig = plt.figure(1, figsize=figuresize, dpi=dotperinch)
#pp.summaryPlot1(clip)
#file2="%s/%s/%s-modshift.pdf" % (clip.config.exportLoc,epic,epic)
#file3="%s/%s/%s-onepage.pdf" % (clip.config.onepageBasename,epic,epic)
cmd = ''
#cmd="gs -dBATCH -dNOPAUSE -q -sDEVICE=pdfwrite -sOutputFile=%s/%s/%s-all.pdf %s %s" % (clip.config.exportLoc,epic,epic, outfile,file2)
#cmd="pdftk %s %s %s output %s/%s/%s-all.pdf" % (outfile,file2,file3,clip.config['exportLoc'],epic,epic)
print cmd
os.system(cmd)
except (KeyError, AttributeError, TypeError), e:
cmd = "None"
print epic, e
print "No Exports"
def createOutputs(clip):
"""
Read in a clip and create outputs.
and appends results to a table (logTableFile)
"""
#Some of this needs to not be hardwired here. This is ugly.
clip['config']['exportLoc']='/soc/nfs/so-nfs/dave/c7-pdc/'
clip['config']['onepageBasename']=clip['config']['exportLoc']
clip['config']['dataStorePath']='/home/smullall/Science/datastore'
epic=str(int(clip.value))
#print clip.serve
try:
clip.serve.time
except AttributeError:
clip=dpp.serveLocalTask(clip)
print 'hi serve'
print clip.serve
try:
print clip.exception
except AttributeError:
pass
#dpp.plotTask(clip)
cmd=""
try:
if clip.disposition.isSignificantEvent:
clip['config']['stellarPar']=['Mass','Rad','Teff','dis','rho','prov','logg']
#clip['config']['stellarFile']='/home/smullall/Science/DAVE/dave/etc/k2EpicCatalogStellarTable5.txt'
clip=stel.addStellarToClip(clip)
clip=stel.estimatePlanetProp(clip)
outfile="%s/%s/epic%s-mp.pdf" % (clip.config['exportLoc'],epic,epic)
mpp.plot_multipages(outfile, clip, outfile)
#fig = plt.figure(1, figsize=figuresize, dpi=dotperinch)
#pp.summaryPlot1(clip)
#file2="%s/%s/%s-modshift.pdf" % (clip.config.exportLoc,epic,epic)
#file3="%s/%s/%s-onepage.pdf" % (clip.config.onepageBasename,epic,epic)
cmd=''
#cmd="gs -dBATCH -dNOPAUSE -q -sDEVICE=pdfwrite -sOutputFile=%s/%s/%s-all.pdf %s %s" % (clip.config.exportLoc,epic,epic, outfile,file2)
#cmd="pdftk %s %s %s output %s/%s/%s-all.pdf" % (outfile,file2,file3,clip.config['exportLoc'],epic,epic)
print cmd
os.system(cmd)
except (KeyError,AttributeError,TypeError),e:
cmd="None"
print epic, e
print "No Exports"
def writeCandidates(clip):
clip['config']['stellarPar']=['Mass','Rad','Teff','dis','rho','prov','logg']
clip['config']['stellarFile']='/home/smullall/Science/DAVE/dave/etc/k2EpicCatalogStellarTable5.txt'
try:
if clip.disposition.isCandidate:
clip=stel.addStellarToClip(clip)
clip=stel.estimatePlanetProp(clip)
outtxt,hdr = createExportString(clip, delimiter=" ", badValue="nan")
else:
outtxt="none"
except (KeyError,AttributeError),e:
outtxt=e
print clip.value,e
def writeTableLine(clip):
clip['config']['stellarPar']=['Mass','Rad','Teff','dis','rho','prov','logg']
clip['config']['stellarFile']='/home/smullall/Science/DAVE/dave/etc/k2EpicCatalogStellarTable5.txt'
try:
if clip.disposition.isSignificantEvent:
clip=stel.addStellarToClip(clip)
clip=stel.estimatePlanetProp(clip)
except (KeyError,AttributeError):
pass
outtxt,hdr = createExportString(clip, delimiter=" ", badValue="nan")
return outtxt
def writeTableLine(clip):
clip['config']['stellarPar'] = [
'Mass', 'Rad', 'Teff', 'dis', 'rho', 'prov', 'logg'
]
clip['config'][
'stellarFile'] = '/home/smullall/Science/DAVE/dave/etc/k2EpicCatalogStellarTable5.txt'
try:
if clip.disposition.isSignificantEvent:
clip = stel.addStellarToClip(clip)
clip = stel.estimatePlanetProp(clip)
except (KeyError, AttributeError):
pass
outtxt, hdr = createExportString(clip, delimiter=" ", badValue="nan")
return outtxt
def runExport(clip,output):
"""
run the exporters based on the input clip.
Append the important information to the output File.
"""
per=np.round(clip['serve.param.orbitalPeriod_days']*10)
epoch=np.round(clip['serve.param.epoch_btjd'])
basedir=clip.config['onepageBasename']
try:
clip['config']['stellarPar']=['Mass','Rad','Teff','dis','rho','prov','logg']
clip=stel.addStellarToClip(clip)
clip=stel.estimatePlanetProp(clip)
except:
print 'No Stellar Values'
outstr,header=ex.createExportString(clip, delimiter=" ", badValue="nan")
fid=open(output,'a')
#fid.write("%s\n" % header)
fid.write("%s\n" % outstr)
fid.close()
tag="%i-%02i-%04i-%s" % (clip.config.value,per,epoch,clip.config.detrendType)
outfile="%s/%i/jvet%s" % (basedir,int(clip.config.value),tag)
thedir=basedir + str(int(clip.config.value))
try:
os.mkdir(thedir)
except OSError:
donothing = -999.
# print "Cannot create directory " + thedir
date=datetime.datetime.now()
if ('disposition' not in clip.keys()):
clip['disposition'] = 'No Disposition Determined'
clip.disposition.isCandidate = 0
clip.disposition.isSignificantEvent = 0
clip['value'] = clip.config.value
mpp.plot_multipages(outfile, clip, date)
return outfile
def writeCandidates(clip):
clip['config']['stellarPar'] = [
'Mass', 'Rad', 'Teff', 'dis', 'rho', 'prov', 'logg'
]
clip['config'][
'stellarFile'] = '/home/smullall/Science/DAVE/dave/etc/k2EpicCatalogStellarTable5.txt'
try:
if clip.disposition.isCandidate:
clip = stel.addStellarToClip(clip)
clip = stel.estimatePlanetProp(clip)
outtxt, hdr = createExportString(clip,
delimiter=" ",
badValue="nan")
else:
outtxt = "none"
except (KeyError, AttributeError), e:
outtxt = e
print clip.value, e
def runExport(clip, output):
"""
run the exporters based on the input clip.
Append the important information to the output File.
"""
per = np.round(clip.bls.period * 10)
epoch = np.round(clip.bls.epoch)
basedir = clip.config["onepageBasename"]
try:
clip["config"]["stellarPar"] = ["Mass", "Rad", "Teff", "dis", "rho", "prov", "logg"]
clip = stel.addStellarToClip(clip)
clip = stel.estimatePlanetProp(clip)
except:
print "No Stellar Values"
outstr, header = ex.createExportString(clip, delimiter=" ", badValue="nan")
fid = open(output, "a")
# fid.write("%s\n" % header)
fid.write("%s\n" % outstr)
fid.close()
tag = "%i-%02i-%04i-%s" % (clip.value, per, epoch, clip.config.detrendType)
outfile = "%s/%09i/jvet%s" % (basedir, int(clip.value), tag)
thedir = basedir + str(int(clip.value))
try:
os.mkdir(thedir)
except OSError:
print "Cannot create directory " + thedir
# print thedir
date = datetime.datetime.now()
if "disposition" not in clip.keys():
clip["disposition"] = "No Disposition Determined"
clip.disposition.isCandidate = 0
clip.disposition.isSignificantEvent = 0
mpp.plot_multipages(outfile, clip, date)
return outfile
