Python dumpObj Examples

Example #1

def doit(fN):
    geneSet = cgGenes3.createGeneSetEditing(fN)

    for transcript in geneSet.transcripts:
        if transcript.id == 'NM_031422':
            dumpObj.dumpObj(transcript)

Example #2

File: labeling_tool.py Project: gt-ros-pkg/hrl

 def slot_save(self):
     dumpObj(self.current_dataset)
     #for poly in self.draw_widget.get_polygons():
     #    dumpObj(poly)
     #self.slot_update_polygons(self.draw_widget.get_polygons(), 1)
     self.scans_database.save()

Example #3

import cgOriginRNA
import cgDB
import dumpObj

oRNA_DC = cgDB.dataController('oRNA', cgOriginRNA.OriginRNA)
id_oRNA = oRNA_DC.load()
id_oRNA[10].name = 'I changed you'
id_oRNA[201].name = 'Another Name'
id_oRNA[10].name = 'Changed Again'
id_oRNA[200].targets = [47, 35, 10000]

dumpObj.dumpObj(id_oRNA[2000])

oRNA_DC.commit(id_oRNA)

Example #4

File: test.testAlignLoad.py Project: JasonAng/ResearchScripts

def testLoad(aDir):
        
        aDC = cgDB.dataController(aDir, cgAlignment.cgAlignment)
        id_alignment = aDC.load()

        dumpObj.dumpObj(id_alignment[2])

Example #5

File: test.py Project: combiochem/ResearchScripts

def doit(fN):
        geneSet = cgGenes3.createGeneSetEditing(fN)

        for transcript in geneSet.transcripts:
                if transcript.id == 'NM_031422':
                        dumpObj.dumpObj(transcript)

Example #6

File: labeling_tool.py Project: wklharry/hrl

 def slot_save(self):
     dumpObj(self.current_dataset)
     #for poly in self.draw_widget.get_polygons():
     #    dumpObj(poly)
     #self.slot_update_polygons(self.draw_widget.get_polygons(), 1)
     self.scans_database.save()