Python get_pdb_text Examples

Example #1

File: gae_server.py Project: sunbc0120/jolecule

    def get(self):
        pdb_id = self.request.get('pdb_id')
        data_server_name = self.request.get('name')

        view_dicts_json = gae_model.get_views_json(pdb_id)
        pdb_text = gae_model.get_pdb_text(pdb_id)
        atom_lines_json = json.dumps(pdb_text.splitlines())

        self.response.out.write(
            jinja_it(
                'templates/data_server.jinja2.js', {
                    'data_server_name': data_server_name,
                    'pdb_id': pdb_id,
                    'atom_lines': atom_lines_json,
                    'view_dicts': view_dicts_json,
                }))

Example #2

File: gae_server.py Project: kaulkie/jolecule

    def get(self):
        pdb_id = self.request.get('pdb_id')
        data_server_name = self.request.get('name')

        view_dicts_json = gae_model.get_views_json(pdb_id)
        pdb_text = gae_model.get_pdb_text(pdb_id)
        atom_lines_json = json.dumps(pdb_text.splitlines())

        self.response.out.write(
            jinja_it(
                'templates/data_server.jinja2.js',
                {
                    'data_server_name': data_server_name,
                    'pdb_id': pdb_id,
                    'atom_lines': atom_lines_json,
                    'view_dicts': view_dicts_json,
                }
            )
        )

Example #3

File: gae_server.py Project: sunbc0120/jolecule

 def get(self):
     pdb_id = self.request.path.split('/')[-1].replace('.txt', '')
     self.response.out.write(gae_model.get_pdb_text(pdb_id))

Example #4

File: gae_server.py Project: kaulkie/jolecule

 def get(self):
     pdb_id = self.request.path.split('/')[-1].replace('.txt', '')
     self.response.out.write(gae_model.get_pdb_text(pdb_id))